Onion yellows phytoplasma OY-M: PAM_179
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Entry
PAM_179 CDS
T00154
Symbol
cbiO
Name
(GenBank) ABC-type cobalt transport system, ATPase
KO
K16786
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PAM_179 (cbiO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poy02000
]
PAM_179 (cbiO)
Transporters [BR:
poy02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
PAM_179 (cbiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
nSTAND3
AAA_10
AAA_29
AAA_15
NB-ARC
AAA_22
AAA_18
AAA_23
RsgA_GTPase
nSTAND1
AAA_33
NACHT
DUF87
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BAD04264
UniProt:
Q6YR39
LinkDB
All DBs
Position
211167..211982
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AA seq
271 aa
AA seq
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MISIQNLTFYYGCNPILKDLNLTIQNNSWVSIVGHNGSGKSTLAKILVGLLSCTKGQILI
DNIVLNEKNLPLLRPKIGMVFQNPDYQFTGLTVREDIAFGLENHNVCREEIIAKVWQYAK
MVKIDDLLDTNVNQLSGGQKQRVAIASILAMEPEIIIFDEVTSFLDPQGALEVQKIIQTI
KNKILITITHDLEFAAKSDEIIVLDQGKLITQTPPQNLFQDPLFLQQYKLNPPLSLELYY
EILKDSTTKNIKNNQMLENLKDILWQYNLKK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatatctattcaaaatttaactttttattacggttgtaatcctattctcaaagacctt
aatttaaccattcaaaataattcttgggtttctattgttggtcataatggctcgggaaaa
tctactttagccaaaattttagtagggctgctttcttgtaccaaaggacaaattttaatt
gacaatatcgttttaaatgaaaaaaatttgccccttttgcgacctaaaataggtatggtt
ttccaaaatcctgattatcagtttacaggacttactgtaagagaagatattgcgtttgga
ttggaaaatcataatgtttgtagagaagaaattatagccaaagtttggcaatatgccaaa
atggtaaaaatagatgatttattggacacaaacgtgaatcaactttcagggggacaaaaa
caacgcgtagcaattgcctccattttagcgatggagcccgaaattattatctttgatgaa
gtaacttcttttttagatcctcaaggcgctttggaagtgcaaaaaattattcaaaccatt
aaaaataaaattttgattaccattactcatgatttagagtttgctgccaaaagtgatgaa
attattgttcttgatcaaggaaaattaattacccaaacccccccccaaaacctttttcaa
gaccctttatttttgcaacaatataaattgaaccctcctttatcattagagctttactat
gaaattttaaaagacagcaccactaaaaacattaaaaataatcaaatgttagaaaattta
aaggatattttatggcaatacaatttgaaaaagtaa
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