Onion yellows phytoplasma OY-M: PAM_237
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Entry
PAM_237 CDS
T00154
Symbol
truB
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
poy
Onion yellows phytoplasma OY-M
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poy03016
]
PAM_237 (truB)
Enzymes [BR:
poy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PAM_237 (truB)
Transfer RNA biogenesis [BR:
poy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAM_237 (truB)
Prokaryotic type
PAM_237 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Ig_ILCR1
Motif
Other DBs
NCBI-ProteinID:
BAD04322
UniProt:
Q6YQY6
LinkDB
All DBs
Position
265512..266363
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AA seq
283 aa
AA seq
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MNGFFLVNKPEKMTSHDVVFQIKKKFHFDKVGHTGTLDPLASGLLIICVGKATKLAFLFD
KLPKTYQGTFLFNKHYDTLDVTGKLLDTKNTPLTDCNIQKSFASFHQKKYLQIPPMFSAV
KIKGKKMYRLARKNQVVDIPPREVFIHHFEKTSLFCRDQVDFLAHVSKGTYIRSLARDLA
LQLNTYGALLRLQRTAIGTHLLQNAKTIENLELNDLILDSTFFAAYDELILNDYLIKLVK
NGTHLDQRQITTKKPFIVKDSNKNFVAYYDTLDENKYYPRYFF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaacggattttttttagtcaacaaaccagaaaagatgacatcacatgatgtagttttt
caaattaaaaaaaaatttcattttgacaaagtaggacacacaggaactcttgatccttta
gcctcaggacttttaattatttgtgtgggtaaagccactaaactggcttttttgttcgat
aaactgccaaaaacttatcaaggaacctttctttttaataaacattatgatactttggat
gtgacaggtaaattgttggataccaaaaacacccctttaactgattgtaacatccaaaaa
agttttgcatcttttcatcaaaaaaagtatttgcaaatacctcctatgttttcagcagtt
aaaattaaagggaaaaaaatgtatcgtttagcacgcaaaaatcaagttgtagatattcct
ccaagagaagtttttattcatcattttgaaaaaacatctttgttttgtcgcgaccaagta
gattttttggcacatgtttccaaaggaacttatattagaagtcttgcgcgcgatctagct
ttgcaattaaatacttatggtgctcttcttcgtttgcaaagaactgcaattggcacgcat
ttattacaaaacgctaaaactattgaaaatttagaactcaatgatttgattttggatagt
actttttttgctgcttacgatgaacttattttaaatgattatttaattaagttagtaaaa
aacggtactcatttagaccaaagacaaataactactaaaaaaccttttatagttaaagat
agtaataaaaattttgttgcttattatgataccttggatgaaaataaatactatccgcgt
tattttttttaa
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