Onion yellows phytoplasma OY-M: PAM_272
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Entry
PAM_272 CDS
T00154
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAM_272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poy03019
]
PAM_272
Messenger RNA biogenesis [BR:
poy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PAM_272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
Chordopox_A13L
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAD04357
UniProt:
Q6YQV1
LinkDB
All DBs
Position
314047..315633
Genome browser
AA seq
528 aa
AA seq
DB search
MKGDYWRTHCIMDCSLLVFALICGSIIGYFLYSFFNQKKLEEKKQAFDDKLKEKEKDLQQ
REQEMMRNAKIEITSLRQKLELDLEQRTNTIVDLESKNNRREELFNNRTESLNKREEHLD
SEQQIISHTKKNLEQQIKEQETILNTQKQQLEKIASLTQDQARQIIMKETRDQTTYEMMS
YIKQEEEKAKSEASKKAKTLLVLAMQKYAGDITGEKNISVVNIPNEDMKGRIIGRQGRNI
KSLEVLTGVDLIIDESPCTIILSSFDPIRREIAKKTLEFLVSDGRIHPSRIEKALETSTI
EVDNFIKEMGEEAAFITKIGEVHPDLIKILGKLHFRISYSQNVLKHSLEVAFLAGKLASE
IGENEILARRAGLFHDIGKALDHEMEGSHVEIGVFIASKYKEKKEVIDAIASHHEDQEPQ
SIIAVLVAIADTLSSARPGARKESVENYIQRLTKLETIANATEGVAKSYAIQAGREIRVI
VEPDKIADNFIFQTARTIKEQIEKDISYNGVIKVTVIRETRAVEMAKL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgattattggcgaactcattgtataatggattgttcccttcttgtctttgct
ttaatttgtggatcaattatcggctattttttgtattctttttttaatcaaaagaaatta
gaagaaaaaaaacaagcatttgacgacaaactaaaagaaaaagaaaaagatttgcaacaa
cgcgaacaagaaatgatgcgtaatgccaaaatagaaataacttctttaagacaaaaatta
gaactggatttagaacaaagaaccaacacaattgttgatttagaatccaaaaataatcgt
cgtgaagaattgtttaacaacagaactgagagcctcaataaaagagaagagcatttagat
tctgaacaacaaataattagccatactaaaaaaaacctagaacaacaaatcaaagaacaa
gaaacaattttaaacacccaaaaacaacaattagaaaaaatagcttccttaacgcaagat
caagccagacaaatcataatgaaagaaacaagagaccaaaccacttatgaaatgatgtca
tatattaaacaagaagaagaaaaagccaaaagcgaagcatctaaaaaagccaaaactctt
ttagttttagccatgcaaaaatatgctggcgatattacaggagaaaaaaatattagcgtt
gttaacattcctaacgaagatatgaaaggacggattattgggcgccaaggcagaaatatt
aagtctttggaagttttaaccggagtagacttaattattgatgagtccccttgcaccatt
attttaagtagttttgacccgattagaagagaaattgccaaaaaaactttagaatttttg
gtctctgatgggcgaattcatccttctcgcatcgaaaaagccttagaaacttcaaccata
gaagtagacaattttattaaagaaatgggcgaagaagctgcttttattactaaaatcggc
gaagtgcaccccgacttaattaaaattttgggaaaactgcacttccgcattagttacagt
caaaatgttttgaaacattctttggaagtagcttttttagctggtaaacttgcctctgaa
attggcgaaaacgaaattcttgcaagaagagcaggactttttcatgacatcggtaaagct
ctagaccacgaaatggaaggaagccacgtagaaattggcgtttttattgcttccaaatac
aaagaaaaaaaagaagttatcgacgctattgcctctcatcatgaagaccaagaaccccaa
tcaattatcgctgttttagttgcaatagcagacaccttgtcttccgctagaccaggagcc
agaaaagaatcagtagaaaactacatccaaagactaaccaaattagaaactattgctaat
gcaacagaaggagttgccaaatcttatgctattcaagctgggcgcgaaattcgtgttatc
gttgaaccagacaaaatcgcagacaattttattttccaaactgcccgcaccattaaagaa
caaattgaaaaagacattagttacaatggtgttatcaaagttactgttataagagaaacc
agagctgtggaaatggctaaattataa
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