KEGG   Onion yellows phytoplasma OY-M: PAM_409
Entry
PAM_409           CDS       T00154                                 
Symbol
dam
Name
(GenBank) site-specific DNA methylase
  KO
K06223  DNA adenine methylase [EC:2.1.1.72]
Organism
poy  Onion yellows phytoplasma OY-M
Pathway
poy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:poy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PAM_409 (dam)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:poy03032]
    PAM_409 (dam)
   03400 DNA repair and recombination proteins [BR:poy03400]
    PAM_409 (dam)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:poy02048]
    PAM_409 (dam)
Enzymes [BR:poy01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.72  site-specific DNA-methyltransferase (adenine-specific)
     PAM_409 (dam)
DNA replication proteins [BR:poy03032]
 Prokaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    PAM_409 (dam)
DNA repair and recombination proteins [BR:poy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     PAM_409 (dam)
Prokaryotic defense system [BR:poy02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    PAM_409 (dam)
SSDB
Motif
Pfam: MethyltransfD12
Other DBs
NCBI-ProteinID: BAD04494
UniProt: Q6YQG4
LinkDB
Position
454082..454966
AA seq 294 aa
MSFYFIYGLRNTKMQKFINWVGCKKKLLPHLLPLIPKKFKTYYEPFLGSGALYLSLMPKK
AILNDNDTQLIQIWKSILYNPQDFYNKALAFENFIYQYPKSQQKQQKEAFKTLLNQYNHL
LTRKKKRLTKASLFFILSKYCFHGILRYKDNTSLYTNFGYKSKYKTSLLNLNDLFSLQKH
FQKNKHVLLCIDYQKIIAVTKKDDFLFIDPPYYNGKNITISSFYKGVFGFTEQVKLFNCL
EKADKRGVKWLYTNYDTPEIRALFKNYYFKSIKSSTTHNLTNKNNNHEIIITNY
NT seq 885 nt   +upstreamnt  +downstreamnt
ttgtctttttattttatttatggattaaggaatacaaaaatgcaaaaattcattaattgg
gttggttgtaaaaagaaattattaccacatcttttacctttaattcctaaaaaatttaaa
acttattacgaaccttttttagggagcggcgctttatatttatccttaatgcctaaaaaa
gccattttaaacgataatgacacacaactcatccaaatatggaaaagtattttatataat
cctcaagatttttataataaagcattagcttttgaaaactttatttatcaatatcccaaa
tcacaacaaaaacaacaaaaagaagcttttaaaacattattaaaccaatataatcattta
ttaacaagaaagaaaaaaagattaaccaaagcatcacttttctttattttaagtaaatat
tgttttcatggcattttaagatacaaagataatacatccttatatacaaattttggttat
aagtctaaatataaaactagcctattaaatttaaatgatttattctccttacaaaaacat
tttcaaaaaaataaacatgtcttgttatgtattgattatcaaaaaataattgccgtcacc
aagaaagatgattttttgtttatcgatccaccttattacaacggcaaaaacatcactata
tcatctttttacaaaggagtttttggttttactgaacaagtgaaattattcaactgtctg
gaaaaagctgataaaagaggagttaaatggttatacaccaattatgatactcccgaaatt
agagcattatttaaaaattattacttcaaaagtatcaaatctagtactacccataatttg
acaaataaaaacaataatcatgaaatcattattaccaattattaa

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