Onion yellows phytoplasma OY-M: PAM_499
Help
Entry
PAM_499 CDS
T00154
Symbol
gyrA
Name
(GenBank) DNA gyrase alpha subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
poy
Onion yellows phytoplasma OY-M
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poy03032
]
PAM_499 (gyrA)
03400 DNA repair and recombination proteins [BR:
poy03400
]
PAM_499 (gyrA)
Enzymes [BR:
poy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PAM_499 (gyrA)
DNA replication proteins [BR:
poy03032
]
Prokaryotic type
DNA Topoisomerases
PAM_499 (gyrA)
DNA repair and recombination proteins [BR:
poy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAM_499 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAD04584
UniProt:
Q6YQ76
LinkDB
All DBs
Position
564456..566963
Genome browser
AA seq
835 aa
AA seq
DB search
MSDQKTQNDEANNHKDHDHGNIQEVNLSKEMKKSFLSYAMSVIVSRALPDIKDGLKPVQR
RILYSMKELGVYSHASYKKAARVVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGH
GNFGSIDGDKAAAMRYTEVKMAKMAMELIKNIDKDTIDFVDNYDGTEKEPLVLPTALPNL
LINGATGIAVGMATKIPTHNLGEVIDGLINYINNKDISIDELMQHIKGPDFPTGGELLGL
QSLKSAYHTGQGAVILKAKSHVSKERGKTSIIVTEIPYQVKKTDLIEKIAFLVKNKIVEE
ITDLRDESSRKGMKIVIELKRDANSKIILNKLYKHSQLRISFGINMVALVGKTPQLVSLK
QILEAFFNFRIEVINRQKSFELKKASARKHLVTALITILEDIETAIKLIKTSTDVKEAQS
KLMQRYNFDEIQSKAILEMSLQRLANQETQKLITEEKNLTQEILECQSIIDSQKKKERIL
EKELLEMKKKYQDDRKTTLNFDAPLNFEDEDLIEEKPIIITITNKGYIKSMDIDTYKQQK
RGGQGVSGMKIYEEDFIEHLAITSTHDYHLFFTNKGKVYQLKGYEIPLGQRQSKGSHLVN
FLPFEKDEFLTSFTSVKNFDQSQDYLFFATKKGIVKKTPLKEYSHISKRGLIAIRLKEND
EVLTVNKTTGTKNIILASNNGNAICFCETKIKSISRNSMGVIGMRLGSDEFLVGAALFDT
DSKEQNILVMTENGFGKITNVNQYRIQERSGKGSKTIKVNDQKGRLITLQVVLPTDDLIV
SSDKGQVVRVAIDQITKTKNKATQGTRIIKLKTGHKAVSVAVVKKEVLDVDGVEN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaaaaaactcaaaacgatgaagccaacaaccacaaagaccacgatcatggc
aacattcaagaagtaaacttaagcaaggagatgaaaaaatccttcttaagttatgcaatg
agcgtaattgtatcaagagctttaccagacattaaagatggcttaaaaccagtccaaaga
cgtattttatatagtatgaaagaattaggcgtctacagtcacgcaagctacaaaaaagca
gctcgtgtagttggggatgttatgggtaaataccatcctcatggagattcaagcatttat
gaggcaatggtaagaatggctcaagattttagttaccgttatcctttagtagatggtcat
ggaaactttggttcaattgatggcgacaaagcagcagctatgcgttatactgaagttaaa
atggcaaaaatggcaatggaactaatcaaaaacattgacaaagacacaattgattttgtt
gataattacgatggtactgaaaaagaaccattagtacttccaacagctcttcccaactta
ttaattaacggagctacaggaattgcagtaggaatggcaaccaaaatccctactcataat
ttaggcgaagtcattgatggtttaattaactacattaataataaagacatttccattgat
gaattaatgcaacacatcaaaggacctgattttcctactggtggcgaacttttaggctta
caaagtttaaaaagtgcttatcacaccggacaaggagctgttatcttaaaggctaaaagt
cacgtttcgaaagaaagaggaaaaacttcaatcattgttacagaaattccttatcaagtc
aaaaaaactgatctaattgaaaaaattgcttttctagttaaaaacaaaatagtagaagaa
atcacagaccttagagacgaatccagtcgcaaaggaatgaaaattgtaatcgaacttaaa
agagacgcaaacagtaaaattattcttaacaagctttataaacattcccaattaagaatt
tcttttggtatcaatatggttgccttagttggaaaaactccccaattagtttctttaaaa
caaatcttagaagcttttttcaatttccgcatcgaagttattaaccgccaaaaaagcttt
gaactcaaaaaagcaagcgcaagaaaacatttagtaacagctcttatcactattttagaa
gacatcgaaactgctattaaactcatcaaaacttctacagatgtcaaagaagcccaaagc
aaattaatgcaaagatacaattttgatgaaatacaaagcaaagccattttagaaatgagc
ctccaaagacttgctaaccaagaaactcaaaaacttatcactgaagaaaaaaacctcact
caagaaattttagaatgccaaagtatcattgattcccaaaagaaaaaagaacgcatttta
gaaaaagaacttctagaaatgaagaaaaaataccaagatgacagaaaaactaccctcaat
tttgatgctcccctaaactttgaagacgaagatttaatcgaagaaaaacctatcattatt
acaattactaacaaaggctacatcaaaagcatggatattgatacttacaaacaacaaaaa
agaggtgggcaaggcgtttctggtatgaaaatctacgaagaagactttattgaacatcta
gcaattacttctactcacgattatcacttattttttactaacaaaggcaaagtctatcaa
ctcaaaggctacgaaattcctttaggtcaaagacaatccaaaggaagccatcttgttaat
ttcttaccattcgaaaaagacgaatttttaacttctttcaccagtgttaaaaactttgat
caatcccaagattacttattctttgctaccaaaaaaggcatagtcaaaaaaacacctctc
aaagaatacagccacatttccaaaagaggtcttattgcaattaggttaaaagaaaacgat
gaagtccttacagtaaacaaaaccacaggcactaaaaatatcattctagcatctaacaat
ggcaatgctatttgtttttgtgaaaccaaaattaaaagtattagtcgcaacagtatgggt
gtaattggcatgcgtcttggaagtgatgaattcttagtaggagctgctttatttgacact
gattccaaagaacaaaacattttagtaatgactgaaaacggctttggaaaaatcaccaat
gtcaaccaataccgcattcaagaacgtagtggcaaaggctctaaaactatcaaagtaaac
gaccaaaaaggaagacttattaccctacaagttgtcctccctacagatgatcttattgtt
tcttctgacaaaggacaagtagtaagagtagcaattgaccaaattaccaaaaccaaaaac
aaagctacccaaggaacgcgcatcatcaaattaaaaacaggtcataaagcagtttcagta
gcagttgtcaaaaaagaagtacttgatgtagatggcgtagaaaattaa
DBGET
integrated database retrieval system
