Onion yellows phytoplasma OY-M: PAM_603
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Entry
PAM_603 CDS
T00154
Symbol
lpd
Name
(GenBank) fatty acid/phospholipid biosynthesis enzyme
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy00010
Glycolysis / Gluconeogenesis
poy00020
Citrate cycle (TCA cycle)
poy00260
Glycine, serine and threonine metabolism
poy00280
Valine, leucine and isoleucine degradation
poy00620
Pyruvate metabolism
poy00630
Glyoxylate and dicarboxylate metabolism
poy00640
Propanoate metabolism
poy00670
One carbon pool by folate
poy00785
Lipoic acid metabolism
poy01100
Metabolic pathways
poy01110
Biosynthesis of secondary metabolites
poy01120
Microbial metabolism in diverse environments
poy01200
Carbon metabolism
poy01210
2-Oxocarboxylic acid metabolism
poy01240
Biosynthesis of cofactors
Module
poy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PAM_603 (lpd)
00020 Citrate cycle (TCA cycle)
PAM_603 (lpd)
00620 Pyruvate metabolism
PAM_603 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
PAM_603 (lpd)
00640 Propanoate metabolism
PAM_603 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAM_603 (lpd)
00280 Valine, leucine and isoleucine degradation
PAM_603 (lpd)
00310 Lysine degradation
PAM_603 (lpd)
00380 Tryptophan metabolism
PAM_603 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PAM_603 (lpd)
00670 One carbon pool by folate
PAM_603 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poy04147
]
PAM_603 (lpd)
Enzymes [BR:
poy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PAM_603 (lpd)
Exosome [BR:
poy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PAM_603 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_oxidored
DAO
AlaDh_PNT_C
GIDA
FAD_binding_2
NAD_binding_8
FAD_binding_3
2-Hacid_dh_C
UDPG_MGDP_dh_N
Trp_halogenase
Thi4
3HCDH_N
NAD_Gly3P_dh_N
HNF-1B_C
Motif
Other DBs
NCBI-ProteinID:
BAD04688
UniProt:
Q6YPX2
LinkDB
All DBs
Position
681596..682969
Genome browser
AA seq
457 aa
AA seq
DB search
MKNYDVLVIGGGPGGYVAAIKAAQMGAKVALVEKHKLGGICLNYGCIPTKAYLKSAKMYK
DIKRCADFGIKVQNGVSFDWSSILSRKNKIVAQLTTGISFLLKKNKIDFYHGFASVLSPC
EVQVDTNLLHTQKLIIATGSTAFVTPIPGAQEAYQKGILKTSKELLQLESYPSKVTIVGG
GVIGVEFATIFNSFGSEVTILERQDNILNGMDRDVVVAYTKKLQADGIQILTQVEVTKIN
DNQTTYTQKGNAKTITSDVILMAVGTKANLAGLEKLNLALNRNSVQTDNFCQTSIPGVYA
IGDVNGKHMLAHVASHEGIVAVTHALEQKAQPINYDRVPACIYGFPEIASIGMTEQQAKE
KQMDYKVSKISLGAVGKSLADGEKEGFAKLIVCKKHLEILGMHIYAYNATELISEMAVGM
ELEGTAYELSQAIHPHPTLSELTFEALLGAVDKPIHA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatgatgttttagtgattggtggaggtcctggtggatacgttgctgccatt
aaagctgctcaaatgggtgctaaagttgctttagtagaaaaacataaattaggtggtatt
tgtcttaattatggctgtattcctaccaaagcttatttaaaaagtgccaaaatgtataaa
gatatcaaacgttgtgctgattttggaattaaagtacaaaacggagtttcttttgattgg
tcctccattttatcacgcaaaaataaaattgttgctcaacttactacaggcatatctttt
ctcctgaaaaaaaataaaattgatttttaccatggttttgcaagtgttctttctccttgc
gaagtccaagtagacactaacttattgcacacccaaaaattaattattgcaacaggaagt
accgcttttgttactcctattccaggcgcccaagaagcttatcaaaaaggcattcttaaa
actagtaaagaattactacaactagaaagctatccttccaaagttactattgtaggaggc
ggtgttattggagtagaatttgcaactatttttaattcttttggtagcgaagtgactatt
ttagaaagacaagacaatattctaaatggtatggatagggacgttgttgttgcatacact
aaaaaacttcaagcagacggcatccaaattttgactcaagtagaagtaactaaaattaat
gacaatcaaactacctacactcaaaaaggcaatgccaaaacaattacttcggatgttatt
ttaatggctgtaggcaccaaagccaatcttgcaggcttagaaaaattaaatttagccctc
aaccgcaatagcgtccaaactgataatttttgtcaaacttcaattcctggagtatatgct
attggtgatgtaaacggcaaacacatgttagctcacgtggcaagtcatgaaggtattgta
gctgtgactcacgctttagaacaaaaagcacaacccattaattatgaccgtgttcctgct
tgtatttatggttttcctgaaattgcttctattggcatgaccgaacaacaagccaaagaa
aaacaaatggattataaagtttctaaaatatctctcggagctgttggaaaatctttagct
gatggcgaaaaagaaggttttgctaaattaattgtttgcaaaaaacatttagaaatttta
ggaatgcatatttatgcttacaatgctactgaattaattagcgaaatggctgtaggaatg
gaacttgaaggaactgcttacgaactatctcaagcaattcatcctcatcctaccttatca
gaacttacttttgaagctcttttaggagccgttgacaaaccaattcatgcataa
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