Onion yellows phytoplasma OY-M: PAM_614
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Entry
PAM_614 CDS
T00154
Name
(GenBank) hypothetical protein
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAM_614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poy03021
]
PAM_614
03400 DNA repair and recombination proteins [BR:
poy03400
]
PAM_614
Transcription machinery [BR:
poy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAM_614
DNA repair and recombination proteins [BR:
poy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAM_614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TFIIE_beta
Motif
Other DBs
NCBI-ProteinID:
BAD04699
UniProt:
Q6YPW1
LinkDB
All DBs
Position
complement(692554..693063)
Genome browser
AA seq
169 aa
AA seq
DB search
MKKTKTPKSLLETAYDIMKKHHNPVSVYDLLKQTLQKHQIPNNNPNVANQLYLDIALSGK
FVFCEDNQLIIKENNKLFWDKDFFEKTQISKDEPLDEDTNLQELDFEDFLSDKDTVQTDP
LQDDLLDLEDEPSEEQNKDDDKIEDDIVLEDKDDYEEPLEEEYEHLYKK
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccaaaactccaaaatcacttttggaaactgcttatgacattatgaaaaaa
catcacaatcctgtttcagtctatgatttattaaaacaaacattgcaaaaacaccaaatc
ccaaataacaaccccaatgtagctaatcagctttatttagacatcgctttgagcggaaaa
tttgttttttgtgaagacaatcaattaattattaaagaaaataataaacttttttgggat
aaagatttttttgaaaaaactcaaatttcaaaagacgaacctctagacgaagataccaat
ttacaagaattagattttgaggatttcctttctgacaaagacactgtccaaactgaccct
ctacaagatgatttgcttgatttagaagacgaaccttcagaagaacaaaacaaagacgat
gacaaaattgaagatgatattgttttagaagacaaagatgattatgaagaaccattagaa
gaagaatacgaacatctttataaaaaataa
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