KEGG   Onion yellows phytoplasma OY-M: PAM_614
Entry
PAM_614           CDS       T00154                                 
Name
(GenBank) hypothetical protein
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
poy  Onion yellows phytoplasma OY-M
Pathway
poy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:poy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PAM_614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poy03021]
    PAM_614
   03400 DNA repair and recombination proteins [BR:poy03400]
    PAM_614
Transcription machinery [BR:poy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PAM_614
DNA repair and recombination proteins [BR:poy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PAM_614
SSDB
Motif
Pfam: HARE-HTH TFIIE_beta
Other DBs
NCBI-ProteinID: BAD04699
UniProt: Q6YPW1
LinkDB
Position
complement(692554..693063)
AA seq 169 aa
MKKTKTPKSLLETAYDIMKKHHNPVSVYDLLKQTLQKHQIPNNNPNVANQLYLDIALSGK
FVFCEDNQLIIKENNKLFWDKDFFEKTQISKDEPLDEDTNLQELDFEDFLSDKDTVQTDP
LQDDLLDLEDEPSEEQNKDDDKIEDDIVLEDKDDYEEPLEEEYEHLYKK
NT seq 510 nt   +upstreamnt  +downstreamnt
atgaaaaaaaccaaaactccaaaatcacttttggaaactgcttatgacattatgaaaaaa
catcacaatcctgtttcagtctatgatttattaaaacaaacattgcaaaaacaccaaatc
ccaaataacaaccccaatgtagctaatcagctttatttagacatcgctttgagcggaaaa
tttgttttttgtgaagacaatcaattaattattaaagaaaataataaacttttttgggat
aaagatttttttgaaaaaactcaaatttcaaaagacgaacctctagacgaagataccaat
ttacaagaattagattttgaggatttcctttctgacaaagacactgtccaaactgaccct
ctacaagatgatttgcttgatttagaagacgaaccttcagaagaacaaaacaaagacgat
gacaaaattgaagatgatattgttttagaagacaaagatgattatgaagaaccattagaa
gaagaatacgaacatctttataaaaaataa

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