Onion yellows phytoplasma OY-M: PAM_698
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Entry
PAM_698 CDS
T00154
Symbol
himA
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
poy
Onion yellows phytoplasma OY-M
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poy03032
]
PAM_698 (himA)
03036 Chromosome and associated proteins [BR:
poy03036
]
PAM_698 (himA)
03400 DNA repair and recombination proteins [BR:
poy03400
]
PAM_698 (himA)
DNA replication proteins [BR:
poy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PAM_698 (himA)
Chromosome and associated proteins [BR:
poy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PAM_698 (himA)
DNA repair and recombination proteins [BR:
poy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PAM_698 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
REC104
TERB2
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAD04783
UniProt:
Q6YPM7
LinkDB
All DBs
Position
complement(790728..791060)
Genome browser
AA seq
110 aa
AA seq
DB search
MTKKELIKSIAEKNKTSITQTEEFYNSFENAIIKAITNNAEVVLSSKLGKFILKTRKAHL
TPETKFIINKRTGKKNAQRTGKNLKIPSKTVVTFKLSKTIKDKVKELKLK
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattaattaaatcaatagctgagaaaaacaaaacctcaataacccaa
accgaagaattttacaactcgtttgagaatgcaataattaaagcaatcacaaacaacgcg
gaagtagttttatcatctaaactcggtaaattcatcttaaaaactagaaaagcccaccta
acccccgaaactaaatttatcatcaataaacgcacaggcaaaaaaaacgcccaaagaact
ggaaaaaacttaaaaattccttcaaaaacagtagtaacttttaaactttctaaaaccatc
aaagataaagttaaagaactaaaattaaaataa
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