Pontivivens ytuae: I0K15_06715
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Entry
I0K15_06715 CDS
T06919
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
poz
Pontivivens ytuae
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poz03009
]
I0K15_06715 (rimO)
Enzymes [BR:
poz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I0K15_06715 (rimO)
Ribosome biogenesis [BR:
poz03009
]
Prokaryotic type
ribosomal protein modification factors
I0K15_06715 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Thioredoxin_6
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QPH55421
UniProt:
A0A7S9LUJ4
LinkDB
All DBs
Position
1392245..1393624
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AA seq
459 aa
AA seq
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MSLNPPNLRPDLAPRAAVGDTARPGQPKIGMVSLGCPKALVDSERILTRLRAEGYAITGD
YAGANAVIVNTCGFLDSAKAESLEAIGEALQENGKVIVTGCLGAEEDYIRGTHPSVLAVT
GPHQYEQVLDAVHDAVPPDPDPFIDLLPPAGLKLTPRHFAYLKISEGCNHKCKFCIIPDM
RGRLASRPVHAVLREAEKLVESGVKEILVISQDTSAYGVDRKHDVHDWQGREVRTHIEDL
SREMATLGAWVRLHYVYPYPHVDKLIPHMGENLLPYLDIPFQHSHPDVLKRMARPAASAK
TLERIAAWRAINPEIVLRSTFIVGYPGETEAEFQHLLDWMEEARLDRVGAFKYENVAGAR
SNALPDHVSEEVKEERYARFMEVAQRISAEKLAAKVGTRLDVIVDEVDGEGAVCRTKADA
PEIDGNLFIDEGFEALSPGDIVTVEVDEASEYDLWGTPV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaacccgccgaatctgcgccccgacctcgcgccgcgcgccgcggtcggcgac
accgcccgtcccggccagccgaagatcggcatggtctcgctcggctgtccaaaggcgctg
gtggacagcgagcgcatcctgacgcggctgcgagcagagggctacgcgatcaccggtgac
tatgcgggtgccaacgcagtgatcgtgaacacctgcggcttcctcgacagcgcgaaggcc
gagagcctggaggcgatcggcgaggcgttgcaggagaacggcaaggtcatcgtcaccggc
tgtctgggggcggaggaggactacatccgcggcacccatccgtcggtgctcgccgtcacc
gggccgcaccagtacgagcaagtgctggatgccgtgcacgacgccgtgccgccggacccc
gaccccttcatcgacctgctgccgcctgcagggctgaagctcacgccacgccacttcgcg
tatctgaagatctccgagggctgcaatcacaagtgcaagttttgcatcatcccggatatg
cgtgggcggctggcctcccgccccgtccacgcagtgctgcgcgaggcggaaaagctggtg
gagagcggggtgaaggagatcctcgtgatctcgcaggacacgtcggcctacggggtggac
cggaagcatgacgtgcacgactggcaagggcgcgaggtccggacccatatcgaggacctg
tcgcgggagatggcgacgctcggggcgtgggtcaggctccactacgtctatccgtacccg
catgtggacaagctgatcccgcatatgggcgagaacctgctgccctacctcgacatccct
ttccagcactcccaccccgacgtgctcaagcgcatggcccgccccgcggcctcggcgaag
acgctggagcgcatcgccgcctggcgcgcgatcaacccggagatcgtcctgcgctccacc
ttcatcgtcggctatcccggcgagacggaagccgagttccagcacctgctcgactggatg
gaggaggcgcgactcgaccgggtcggcgccttcaagtatgaaaacgtggccggcgcccgc
tccaacgccttgcccgaccacgtgtccgaagaggtgaaggaggagcgctacgcccgcttc
atggaggttgcccagcgcatctcggccgagaagctggcggccaaggtcggcacccgcctc
gacgtgatcgtggacgaggtggacggcgagggggccgtctgccgcaccaaggcggatgcg
ccggagatcgacggcaacctcttcatcgacgagggcttcgaggcgctctcgcccggcgac
atcgtgacggtcgaggtcgacgaggccagcgaatacgacctctggggcacgccggtctga
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