Pontivivens ytuae: I0K15_09665
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Entry
I0K15_09665 CDS
T06919
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
poz
Pontivivens ytuae
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poz03032
]
I0K15_09665 (topA)
03400 DNA repair and recombination proteins [BR:
poz03400
]
I0K15_09665 (topA)
Enzymes [BR:
poz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I0K15_09665 (topA)
DNA replication proteins [BR:
poz03032
]
Prokaryotic type
DNA Topoisomerases
I0K15_09665 (topA)
DNA repair and recombination proteins [BR:
poz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I0K15_09665 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
CARME
Toprim_4
Toprim_2
FGase
Motif
Other DBs
NCBI-ProteinID:
QPH55968
UniProt:
A0A7S9QE51
LinkDB
All DBs
Position
complement(1973522..1976203)
Genome browser
AA seq
893 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGKDFTVLASYGHVRDLPPKDGSVDPDNGFEMTWEVASQSQK
HVRAIADALKDDDKLILATDPDREGEAISWHLTEALTKRRAIKKSTAVERVVFNAITKSA
VTEAMKNPRQVDMELVEAYLARRALDYLVGFKLSPVLWRRLPGAKSAGRVQSVALRLIVE
REMEIEAFRPREYWSVRAVLETPRSQSFEARLTVLGGKKLDRYDLETAEAAELAVTAVAS
RDLKVLSVEAKPATRNPSPPFMTSTLQQEASRKFSWGARQTMQVAQRLYEAGYITYMRTD
GIDMAPEAVTGAREAITARYGTNYVPEKPRLYKNKAKNAQEAHECIRPTEMNRGPDEIDV
EADQRKLYDLIWKRSIASQMASAKLERTTVDVGSTDGEVVLRATGQVVTFDGFLKVYEEG
RDDAEDEDSKRLPQIMEGEALKRLADGLAADHKKLSEGDTKAILAGEGAVLGQQHFTQPP
PRYTEATLVKRMEELGIGRPSTYASIVTTIQDRDYVRKDKNRLIPQDKGRLVTAFLENFF
RRYVSYDFTAKLEEDLDHVSAGDADWQELLDRFWRDFHAALDEAMEHSITDVLEKINEVL
EPHLFPPKEDGSDPRLCPNCGIGRLSMKTARSGGAFIGCSNYPECRYTRPLAGELEGGDV
AGPDGKLLGQDEHGTPVTLRAGRFGPYVQLGEPTEEVPKPKRASVPKGQELENVTLEMAL
DWLQLPRFIGDHPEGGPIEANIGRFGPYVMHTAPTEGKEKPKKIYANLSDPEEVLTIGLN
RAVDLIEQKKLNPGRRGQAAEPLKALGDHPDGGPVNVMKGRYGPYVKWEKVNATLPKDVK
PEDVTMEQALALIEEKAGAKAKKKPTKKKTGPKKAAAKKPAAKKKAATGEAAE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgtcgttgtcgagagcccggccaaggccaagacgatcaacaagtatctcgga
aaggacttcacggtcctcgcgtcctacggccatgtgcgcgacctgccacccaaggacggc
tccgtcgaccccgacaacgggttcgagatgacgtgggaggtggcctcccaatcgcagaag
catgtccgcgccatcgcggacgcgttgaaggatgacgacaagctgatcctcgcgaccgac
cccgaccgggaaggcgaggcgatctcctggcacttgacggaggcgctgaccaagcgccgc
gcgatcaagaagtccacggcggtggagcgggtggtcttcaacgccatcaccaagtccgcc
gtgaccgaggcgatgaagaacccgcgccaggtcgacatggagctggtggaggcatatctc
gcccgccgcgcgctcgactacctcgtcgggttcaagctctcaccggtgctgtggcgccgc
ctgcccggcgcgaaatccgcgggccgcgtgcagtccgtcgccctgcggctcatcgtcgag
cgggagatggagatcgaggcgttccgtccacgcgagtactggtccgtccgcgccgttctg
gaaacgccccgcagccagagcttcgaagcgcgcctgacggtgctcggcggcaagaagctc
gaccgctacgacctggaaacggcggaggccgcggagctcgccgtgaccgccgtcgcctcc
cgcgacctcaaggtgctgagcgtcgaggcgaaaccggcgacccgcaacccctcgccgccc
ttcatgacctccacgctgcagcaggaggcgtcgcgcaagttctcctggggtgcgcggcag
accatgcaggtggctcagcgcctctacgaggcgggctacattacctacatgcggaccgac
ggtatcgacatggcgcccgaggccgtgaccggcgcgcgtgaggcgatcaccgcccgctac
ggcacgaactacgttcccgagaagccgcgcctctacaagaacaaggcgaagaacgcgcag
gaagcgcacgagtgcatccgcccgaccgagatgaaccgcggtccggacgagatcgacgtc
gaggcggaccagcgcaagctctacgacctgatctggaagcgctccatcgcctcccagatg
gcgagtgcgaagctggagcggacgacggtggatgtcggctcgacggatggcgaggtcgtg
ctgcgcgccaccggccaggtcgtgaccttcgacggcttcctcaaggtctatgaggaaggg
cgcgacgatgcggaggacgaggattcgaagcggctgccccagatcatggagggcgaggcg
ctgaagcggctcgccgacgggctcgccgcggatcacaagaagctctccgaaggcgacacg
aaggcgatcctcgcaggcgagggcgcggtgctcggccaacagcacttcacccagccgccg
ccgcgctacaccgaggcgacgctcgtcaagcggatggaggagctcggcatcgggcggccc
tccacctacgcctcgatcgtcacgacgatccaggaccgggactacgtgcggaaggacaag
aaccgcctgattccacaggacaagggccggctggtcacggccttcctcgagaacttcttc
cgccgctatgtgagctacgacttcaccgcgaagctggaggaggacctcgaccacgtctcc
gccggggatgcggattggcaggagctgctcgaccggttctggcgcgacttccacgccgcg
ctcgacgaggcgatggagcactcgatcaccgacgtgctcgagaagatcaacgaggtgctg
gagccgcaccttttcccgccgaaggaggacggctccgacccgcgcctctgcccgaattgc
gggatcggccggctgtcgatgaagacggcccgctcgggcggcgcgttcatcggctgctcg
aactaccccgagtgccgctacacccggccgctcgcgggtgagctagaaggcggtgatgtc
gcaggcccggacggcaagctgctcggccaggatgagcacggcacgccagtgacgctacgc
gccgggcgattcggcccctacgttcagctcggcgaacccaccgaggaagtgccgaagcct
aagcgcgcctcggtccctaagggtcaggagctggagaacgtcacactggaaatggcgctc
gactggctgcagctgcctcgcttcatcggcgaccatccggagggtggcccgatcgaggcc
aatatcggtcgcttcggtccctacgtaatgcacaccgccccgaccgaggggaaggagaaa
ccgaagaagatctacgccaacctctccgaccccgaggaggtgctgaccatcggcctgaac
cgggccgtcgacctgatcgagcagaagaagctcaacccgggtcggcgagggcaggcggcc
gagccgctgaaggcgctcggtgaccaccccgacggcgggccggtcaacgtcatgaaggga
cgctacggcccctacgtgaagtgggagaaggtgaacgccacgttgcccaaggacgtgaag
cccgaggacgtgacgatggaacaggccctcgccttgatcgaggagaaggcgggcgccaag
gccaaaaagaagccgacgaagaagaaaacggggcccaagaaggccgccgccaagaaaccc
gcggcgaagaagaaggccgcgaccggcgaggcggcggagtaa
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