Pontivivens ytuae: I0K15_11765
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Entry
I0K15_11765 CDS
T06919
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
poz
Pontivivens ytuae
Pathway
poz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I0K15_11765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poz03021
]
I0K15_11765
03400 DNA repair and recombination proteins [BR:
poz03400
]
I0K15_11765
Enzymes [BR:
poz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I0K15_11765
Transcription machinery [BR:
poz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I0K15_11765
DNA repair and recombination proteins [BR:
poz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I0K15_11765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QPH52502
UniProt:
A0A7S9LNR7
LinkDB
All DBs
Position
2412747..2413763
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQALIRPTSLEIKPGNDPKRQATAVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDGVLHEFSSVAGVREDVTDIVLNLKGVALSMDVEGPKRLSISAKGPGVVTAADISE
SAGIEVLNKDHVICHLDDGASVYMELTVETGKGYVAADRNRPEDAPIGLISVDALYSPVR
KVSYKVEPTREGQVLDYDKLTLNVETDGSVTPDDAIAYAARILQDQLNVFVNFEEPEAAT
RAEEEDDLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLTGMGLHLGMDIVDWPPENIEDLAKKYEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactggcaggctctcatccgccccaccagcctcgagatcaagccgggc
aacgaccccaagcgccaggcgaccgccgtcgccgagccgctggagcggggattcggcctg
accctgggcaacgccctgcgccgcgtgctcctcagctcgctgcagggggccgccatcacc
tccgtccagatcgacggggtgctgcatgagttttcctccgtcgcgggcgtgcgcgaggac
gtgaccgacatcgtcctgaacctcaagggcgtcgccctctcgatggacgtcgaggggccg
aagcgcctgtcgatctcggccaagggaccgggcgtcgtgaccgccgccgacatctccgaa
agcgcgggcatcgaggttctcaacaaggaccacgtgatctgccacctcgacgatggtgcc
tccgtctacatggagctgacggtcgagacgggtaagggctacgtcgccgccgaccgcaac
cggcccgaggacgcgccgatcggcctgatttcggtcgatgcgctctactcgccggtgcgc
aaggtgagctacaaggtcgagccgacccgcgagggccaggtgctcgactacgacaagctg
accctgaacgtggagaccgacggctccgtcacaccggacgacgcgatcgcctatgcggcg
cgcatcctgcaggaccagctcaacgtcttcgtcaacttcgaggagcccgaggccgcgacc
cgcgccgaggaagaggacgacctggagttcaacccgcttctcttgaagaaggtggacgag
ctcgaactgtcggtccgctccgcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggcggagatgctgcgcaccccgaacttcggccgcaagtcg
ctcaatgagatcaaggaagtgctcaccggcatgggcctgcacctcggcatggacatcgtc
gattggccgcctgagaacatcgaggatctggccaagaagtacgaggaccagttctaa
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