Pontivivens ytuae: I0K15_12955
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Entry
I0K15_12955 CDS
T06919
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
poz
Pontivivens ytuae
Pathway
poz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I0K15_12955 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poz03019
]
I0K15_12955 (pnp)
03016 Transfer RNA biogenesis [BR:
poz03016
]
I0K15_12955 (pnp)
Enzymes [BR:
poz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I0K15_12955 (pnp)
Messenger RNA biogenesis [BR:
poz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I0K15_12955 (pnp)
Transfer RNA biogenesis [BR:
poz03016
]
Prokaryotic type
tRNA degradation factors
I0K15_12955 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QPH52718
UniProt:
A0A7S9QBB9
LinkDB
All DBs
Position
complement(2636966..2639089)
Genome browser
AA seq
707 aa
AA seq
DB search
MFNEFKKSIEWGGDTLTLETGKIARQADAAVVATYGETSVMAAVVFEKQPKEGFDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTSRLIDRPIRPLFVPGFKHETQVICTVLSH
DLENDPDVVAMIAASAALTLSGAPFLGPIGCARVGYAGGEYVLNPSVDDMHKLRENPEQQ
LDLVVAGTKDAVMMVESEAYELSEEVMLGAVTFGHEQMQPVIDMIIALAEDCANEPFDFT
PPDYTALYEKVKGLGEADMRAAFAIRDKQERQAAISAAREKVREGLSEEELEDKNLGSAF
KKLESAVLRGDVVKNGNRIDGRALDTVRPIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGESRSNFLLHYNFPPYSVGEAGRMAGPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLVLEEDGDYA
VLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPQIMETALAQAKDGRMHILAE
MAKALTGAAEFSVHAPRIETMTVPQDKIREVIGSGGKVIRGIVEESGAKVDINDDGVIKI
ASPNGEAIEKARAMIHSIVAEPEVGEIYTGKVVKLMDFGAFVNFFGKRDGLVHVSQLSNE
RVGHPKDVLKEGQEVKVKLVGFDDRGKVRLSMKVVDQETGQEIAAEG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaattcaagaagtccatcgaatggggcggcgacacgctgaccctggagacc
ggcaagatcgcccgtcaggcggatgccgccgtcgtcgccacctatggcgagacctccgtg
atggccgccgtggtgttcgagaagcagccgaaggagggtttcgacttcttcccgctgacc
gtccactatcaagagaagtattacgccgccggcaagatccccggcggcttcttcaagcgc
gaggcgcgcccgacggagaaggagacgctgacctcgcgcctcatcgaccgtccgatccgc
ccgctctttgtcccgggcttcaagcatgagacgcaggtgatctgcaccgtgctgagccac
gatctggagaacgacccggacgtggtggcgatgatcgccgcatcggccgcactgaccctg
tcgggcgcgccgttcctcggcccgatcggctgcgcgcgcgtcggctacgcgggtggcgag
tacgtgctgaacccgtccgtggacgacatgcacaagctgcgcgagaaccccgagcagcag
ctcgacctcgtcgtcgcgggcaccaaggacgcggtgatgatggtcgaatcggaggcctac
gagctctccgaagaggtcatgctgggtgcggtcaccttcggtcatgagcagatgcagccg
gtcatcgacatgatcatcgcgctcgccgaggattgcgccaacgagccgttcgacttcacc
ccgccggactacaccgcgctctacgagaaggtgaagggtctgggcgaggccgacatgcgc
gccgccttcgcgatccgcgacaagcaggagcgccaggccgccatctccgccgcgcgcgag
aaggtgcgcgaggggctgagcgaggaagagctggaggacaagaacctcggctccgccttc
aagaagctggaatccgccgtgctgcgcggcgacgtggtgaagaacggcaaccggatcgac
ggccgtgccctcgacaccgtgcgcccgatcgtgtgcgaaacgggcttgctgccccgcacc
cacggctccgcgctcttcacccgtggtgagacgcagggccttgtggtaaccacgctcggc
accggcgacgatgagcagatcatcgacgcgctgcatggcgagagccgctcgaacttcctg
ctgcactacaacttccccccctactcggtgggtgaggcaggccgcatggctggccccggc
cggcgcgagatcggccacggcaagctcgcttggcgcgcgctgcaggcggtgctgccggcg
gcgaccgacttcccctacacgatccgcgtcgtgtcggagatcacggaatccaatggctcc
tcctccatggcctcggtctgcggcggctcgctgtcgatgatggatgcgggcgtgccgctg
aaatccgcggtggcgggcgtggccatgggcctcgtgctggaagaggacggcgactacgca
gtcctgaccgacatcctgggcgacgaggatcacctcggcgacatggatttcaaggtcgcg
ggcaccgagaacggcatcacttcgctccagatggacatcaaggtcgcgggcatcacgccc
cagatcatggagaccgccctggcgcaggccaaggacggccggatgcatatcctggccgag
atggcgaaggccctgacgggtgccgccgagttctccgtccacgcgccgcgcatcgagacg
atgaccgttccgcaggacaagatccgcgaagtgatcggctccggcggcaaggtcatccgc
ggcatcgtcgaggagtcgggtgcgaaggtcgacatcaacgacgacggcgtcatcaagatc
gcgtccccgaacggcgaggcgatcgagaaggcccgcgccatgatccactccatcgtggcc
gagccggaagtgggcgagatctacaccggcaaggtcgtgaagctgatggacttcggcgcc
ttcgtgaacttcttcggcaagcgcgacggcctcgtccacgtctcccagctctccaacgag
cgggtggggcatcccaaggacgtgctgaaggaaggccaggaagtgaaggtcaagctcgtg
ggcttcgacgaccgcggcaaggtccgcctgtctatgaaggtcgtggaccaggaaaccggc
caggagatcgccgccgaaggctga
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