Pontivivens ytuae: I0K15_13160
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Entry
I0K15_13160 CDS
T06919
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
poz
Pontivivens ytuae
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poz03400
]
I0K15_13160 (addB)
Enzymes [BR:
poz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I0K15_13160 (addB)
DNA repair and recombination proteins [BR:
poz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
I0K15_13160 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QPH52757
UniProt:
A0A7S9LP67
LinkDB
All DBs
Position
2679383..2682286
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AA seq
967 aa
AA seq
DB search
MSVYAVPAGADFTACLVEGLTERLAGLPQLERARAQVLLNTRRAQRTVEAALAADTRWTG
LLPAIGTVTDLAEGDAVPPLRRMLHLARLVAAMVEADPGLAPRAAVFDLANSLAALIDEM
DAVGLPPEALAKLDPAGHAEHWQRALAFLRIATEAWPEVRAEAEGGAPDPEALRRAAVRA
RLATWQAAPAPGPVILAGSTGSRAWVRLLMEGITALPQGAIVLPGWDSDLPADIWRDLDL
PADHPQYGLAQVCRALRIDPVHLPLWHGTDGGARGRLVSLALRPAPTTDTWLAEAPARAP
EVAEATADLTLIEAKTPREEAETIAWTLRRAVEAGETAALVTPDRDIARRVTAALDRWGI
VPDDSAGRPLHLTPPGILLRQLAALIGRPVPPADLVALLKHPLVGGTGEERRLHLRRVIG
LQTGERLLDGPAPDWAKLAGWAEDRRNDDGAPGWIAWLRGALAPLGTGGDDLADHIARLR
QVAEALSGGEAGTPTVWDEEAGLAAQAVLDRLAQATDAAGPVRAQDVARLLDTQLAAENV
RAEAFLAEPRIRILGALEARMVRADLTILAGLNEGVWPGRPAPDPWLSRDMRRAVGLELP
ERETGLAAHDIQSALSGGRVVMTRAARVEGAPTVASRWLIRLTNLIEGLGPEGAAAFADM
RARGSRLLAEAVELDRPAQTMSPAPRPNPAPPPEARPRQLSVTRIETLIRDPYAIYARHV
LGLKPLDPPGRAADALMRGTVLHAIMERFATALGGAEGAEARALLDRITEEVLTAEVPAP
AIRALWRGRLLRIADVLVQREVDRRAAGVPVGLEVRGHRDLADPPFRLTAKADRIDRDAA
GRYRIYDYKSGNPPSEKEVRSFAVQLPLEASIAQAGGFAGLDPAPVAHLELIGLGSDART
VPVDPHHEDIAQAWERLAALIAEYAQPGQGYIARSRPRLVKFASDYDHLARRGEWGDADA
APVQVVT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctatgccgtgcccgccggggccgatttcaccgcctgcctggtggaggggctg
acggagcggctcgctggattgccgcagctcgagcgggcgcgggcgcaggttctgctcaac
acccgccgggcgcagcggacggtggaggcggcgctggccgccgatacgcgctggaccggg
ctgctgcctgccatcgggacagtgacggatcttgcggagggcgatgcagtgccgccgctg
cgcaggatgctgcacctcgcccggctggtcgcggcgatggtggaggccgatccgggcctc
gcgccgcgggcggcggtgttcgacctcgccaacagcctcgcggctctgatcgacgagatg
gacgccgtgggcctgccgcccgaggcgctggccaagctcgaccccgcgggccatgcggag
cactggcagcgcgcgctcgccttcctgcgcatcgcgacggaggcgtggcccgaggtgcgg
gcggaggcggagggcggcgcgccggatcccgaggctctgcgtcgggctgcggtgcgcgcg
cggctcgcgacgtggcaggcggcgcctgcgccggggccggtgatcctcgcaggctccacc
ggcagccgggcctgggtgcggctgctgatggaggggatcacggcgctgccgcagggcgcg
atcgtgctgccgggctgggactcggacctgcccgccgacatctggcgcgacctggacctg
cccgccgatcacccgcaatacgggctcgcgcaggtttgccgtgcgctgcggatcgacccg
gtgcacctgccgctgtggcatgggacggatggcggcgcgcgggggcgcctcgtctcgctc
gccctgcgccccgcgccgaccacggacacctggctggcggaggctccggcccgcgcgccc
gaggtggcggaggcgacggcggacctcacgctgatcgaagcgaagaccccgcgggaggag
gccgaaaccatcgcctggaccctgcgccgcgcggtcgaggcgggggagacggcggcgctc
gtcacccccgaccgcgacatcgcgcggcgcgtgacggcggcgctcgaccgctgggggatc
gtgcccgatgacagcgcggggcggccgctgcacctgacgccgccggggatcctgctgcgc
cagctcgcggcattgatcgggcggccggtgcctcctgccgacctcgtggcgctcctgaaa
cacccgctggtcggcggcacgggggaggagaggcggctgcacctgcggcgtgtcatcggg
ctccagaccggggagcggctactcgacggcccggcgccggactgggcgaagctcgccggg
tgggcggaggatcggcggaacgatgacggtgcgcccggctggatcgcgtggctgcgcggg
gcgctggctccgctcggcacgggaggcgacgacctcgcggatcacatcgcccggctccgg
caggtggcggaggcgctgagcggcggcgaggccggtacgccaaccgtctgggacgaggag
gcgggccttgcggcgcaggcggtgctcgaccggctcgcgcaggcgacagacgcggcgggg
ccggtgcgggcgcaggatgtcgcgcgcctcctcgacacgcagctcgcggcggagaacgtg
cgggccgaggcgttcctcgccgagccgcgcatccgcatcctcggcgcgctggaggcacgg
atggtgcgcgcggacctcacgatcctcgctgggctcaacgagggcgtctggccggggcgg
cccgcgcccgatccgtggctgagccgcgacatgcgccgtgccgtggggctggagctgccg
gagcgggaaacgggccttgccgcccacgacatccagtcggcgctgagcggtgggcgcgtg
gtgatgacccgcgcggcccgggtcgagggcgcgccgacggtggcgagccgctggctgatc
cgcctgaccaacctgatcgagggactggggccagagggggcggcggcgttcgcagacatg
cgcgcgcggggatcgcggctgctggcggaagcggtggagctcgaccggcctgcgcaaacg
atgtcgcccgccccgcgccccaacccggccccgccgccggaggcgcggccgcgccagctc
tccgtcacgcggatcgagacgctgatccgcgatccctatgcgatctacgcgcgccatgtg
ttgggcctgaaaccgctcgacccgccggggcgcgcggcggatgcgctgatgcggggcacg
gtgctgcacgcgatcatggagcggttcgcgactgcactcggcggggcggagggggcggag
gcgcgcgcgctgcttgaccggatcaccgaggaggtgctgaccgccgaggttccggcccct
gcgatccgcgcgctctggcgagggcggctcctgcgcatcgcggatgttctagtgcagcgg
gaggtcgaccgtcgcgccgcgggcgttccggtggggctggaggtgcggggacaccgcgac
ctcgccgacccgcccttccgcctcaccgcgaaggccgaccggatcgatcgggatgctgcg
ggccgctaccgcatatacgactacaaatccggcaatccgccgagcgagaaggaggtgcgc
agcttcgccgtgcagctcccgctggaggcttcaattgcgcaggccgggggcttcgcgggc
ctcgaccccgcgcccgtcgcgcatctggagctgatcggcctcggatctgacgccaggacg
gtgccggtcgatccgcatcacgaggatatcgcgcaggcgtgggagcggctcgcggcgctg
atcgccgaatacgcgcagcctggccaaggctacatcgcgcgcagccgcccgcgactggtg
aagttcgcctccgactacgaccatctggcgcgtcggggcgagtggggggacgcggacgct
gcgcccgtgcaggtggtgacatga
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