Pontivivens ytuae: I0K15_14285
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Entry
I0K15_14285 CDS
T06919
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
poz
Pontivivens ytuae
Pathway
poz03030
DNA replication
poz03430
Mismatch repair
poz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I0K15_14285 (dnaE)
03430 Mismatch repair
I0K15_14285 (dnaE)
03440 Homologous recombination
I0K15_14285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poz03032
]
I0K15_14285 (dnaE)
03400 DNA repair and recombination proteins [BR:
poz03400
]
I0K15_14285 (dnaE)
Enzymes [BR:
poz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I0K15_14285 (dnaE)
DNA replication proteins [BR:
poz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I0K15_14285 (dnaE)
DNA repair and recombination proteins [BR:
poz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I0K15_14285 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPH52969
UniProt:
A0A7S9LPX6
LinkDB
All DBs
Position
2907328..2910855
Genome browser
AA seq
1175 aa
AA seq
DB search
MTQPRFIHLRVHSAFSLLEGAIQVKKLPAMAEAAGMPAVAITDTCNNFAALEFSEVAKKA
GLQPIIGTQFPLSYAPPARPGDKAPEPRDIVLIAQNEAGWTNLMRLNTRAYLESGDALPH
ITLDELAEHTEGLICLTGGALGPLGQLIRDGHAPKAKALTERLAALFPDRLYIEIQRHPE
GAERRTQAEAATEPGLVGLAYELDLPLVATNDVHFPQREMYEAHDALICIREGAYVDQAE
PRRRLTPEHYFKTADEMADLFADLPEAAENTIEIARRCAFKVETRDPILPRFADDEVDEL
RRQANEGLKARLEVIEPAAPISDYQDRLDFELGIIESMGFPGYFLIVADFIKWAKDHDIP
VGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQEKYGREKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKLIPVEGVKPVSIEQAL
VDEPRLKEEARQEEVVQRLLDIGQKIEGLYRNASTHAAGVVIGDRPLDRLVPLFKDPRSD
MPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNALDLLKAQGKPMIAPPEGDSIEARARRA
ALEKNPYDISAIPIDDEPTYALYASAHTVAVFQVESSGMRDALRQMKPTCIEDIIALVAL
YRPGPMENIPKFCDVKNGRAERENLHPTIDHILDETQGIIVYQEQVMQIAQEMAGYSLGG
ADLLRRAMGKKIQEAMDAERPKFLAGAAENNVDQAKAQEVWDLLDKFANYGFNKSHAAAY
AVVSYQTAWLKANHPVEFMAGVMNCDIHLTDKLNTYKQEVDRLGIGLVPPCVNRSEATFT
VRDGQVVYALGGLKNVGVEAMRLITEARKDEKGGEKPFLDLFDFARRVDLKRVGKRPLEM
LARAGAFDLLDANRHKVFRSLDQLVAYSAATHEEKTSAQGGLFGDAGEELPAPRLPMPED
WLPTERLAEEHQAIGFYLSGHPLDDYMPALKRKRVMTLAEITKEAARAPKAAKIAGTVSS
KQVRKSARGNRFAFVACSDPTGLYEVTVFGDTLEQAGDFFDTGQNVVMSVEATVEGDSLK
LLARSVAPVDEIVADAGAAGLRIFVTEETAIGSVATRLADLKDGPRRGRGPVNLVLRHPD
LPGEVEIALADQYRITPQIKAALKSAPGVEYVEEF
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccccgattcatccacctccgcgtccactccgccttctcccttctcgaaggg
gcgatccaggtgaagaagctccccgccatggccgaggccgcggggatgcccgccgtcgcc
atcaccgatacctgcaacaatttcgcagcactggagttctccgaggtggcgaagaaggcg
ggtctccagcccatcatcggcacccagttcccgctctcctacgccccgcccgcgcgtccc
ggcgacaaggcgcccgagccgcgcgacatcgtgctgatcgcgcagaacgaggccggctgg
accaacctcatgcgcctcaacacccgcgcctatctggagtccggcgacgcgctcccgcac
atcaccctcgacgagctcgccgagcataccgaggggctgatctgtctgaccggcggcgcg
ctcggccccctcggccaactgatccgggacggccatgcgccgaaagcgaaggcgctgacc
gaacgcctcgcggcgctcttccccgaccgcctctacatcgagatccagcgccatccggag
ggggccgagcgccgcacgcaggccgaggccgcgaccgaacccggcctcgtcggcctcgcc
tacgagctcgacctgccgctcgtcgccaccaacgacgtccatttccctcagcgcgagatg
tacgaggcccacgacgccctcatctgcatccgcgagggcgcctatgtcgatcaggccgaa
ccgcgccgccgcctgacgccggagcactacttcaagaccgccgacgagatggccgacctc
tttgcagacctccccgaagcggccgagaacaccatcgagatcgcccgccgctgcgccttc
aaggtcgagacgcgcgaccccatcctgccgcgcttcgccgatgacgaggtggacgagctg
cgtcgccaggccaacgagggcctcaaggcccggctcgaagtcatcgaacccgccgccccg
atctccgactaccaggaccgcctcgatttcgagctcggcatcatcgagagcatgggcttc
cccggctacttcctgatcgtcgccgacttcatcaagtgggcgaaggatcacgacatcccc
gtcggccccggccgcggctccggcgcgggctccctcgtcgcctacgcgctcaccatcacc
gacctcgacccgctgcgctactcgctcctcttcgagcggttcctcaaccccgagcgggtc
tccatgcccgatttcgacatcgacttctgcatggatcgccgcgaggaagtcatccgctac
gtgcaggagaaatacgggcgcgagaaagtcggccagatcatcaccttcggcgcattgctc
tccaaggccgccgtccgcgatgtcggccgcgtgctccagatgccctacggccaggtggat
cgcctgtcgaagctgatcccggtggagggcgtcaaacccgtctccatcgaacaggccctc
gtggacgaaccgcgcctcaaggaggaggcgaggcaggaggaggtcgtccagcgcctcctc
gacatcgggcagaagatcgaggggctctaccgcaacgcctcgacccacgctgcgggcgtc
gtgatcggcgaccgccccctcgaccggctcgtcccgctcttcaaggacccccgctccgac
atgcccgccacccagttcaacatgaaatgggtcgagcaggcggggctggtgaagttcgac
ttcctgggcctgaaaacactcaccgtcatccagaacgccctcgacctcctgaaggcgcag
ggcaagccgatgatcgcaccgccggagggcgacagtatcgaggcacgcgcccgccgcgcc
gccctcgaaaagaacccctacgacatctcggcgatccccatcgacgacgagccgacctac
gccctctacgcctccgcccacacggtcgcggtgttccaggtggaaagctcgggcatgcgc
gacgccctgcgccagatgaagcccacctgcatcgaggacatcatcgccctcgtcgccctc
taccgccccggcccgatggagaacatccccaagttctgcgacgtaaagaacggccgggcg
gagcgcgagaacctgcaccccaccatcgaccacatcctcgacgagacgcagggcatcatc
gtctaccaggagcaggtgatgcagatcgcgcaggagatggcgggctacagcctcggcggc
gccgacctcctgcgccgcgccatgggcaagaagatccaggaggcgatggacgccgagcgc
cccaagttcctcgccggggccgccgagaacaacgtcgaccaggccaaggcgcaggaggtc
tgggacctcctcgacaagttcgccaactatggctttaacaaatcccacgccgctgcctat
gccgtggtcagctaccagaccgcgtggctcaaggcgaaccatccggtggagttcatggcg
ggcgtcatgaactgcgatatccacctcaccgacaagctcaacacctacaagcaggaggtc
gaccgcctcggcatcggccttgtcccgccttgcgtcaaccgctccgaggccaccttcacc
gtgcgcgacggccaggtcgtctacgcgctcggcgggctgaagaacgtgggcgtcgaggcc
atgcgcctcatcacggaggccagaaaagacgaaaaggggggagaaaaacccttcctcgac
ctcttcgacttcgcccgccgggtggatctcaagcgcgtcggcaagcgcccgctcgaaatg
ctcgcccgcgccggtgccttcgacctgctcgacgccaaccgtcacaaggtgttccgcagc
ctcgaccagctcgtcgcctattccgccgccacccatgaggagaagacctccgcccaaggc
ggcctcttcggcgacgcaggcgaggagctgcccgcgccccgcctccccatgcccgaggac
tggctcccgaccgagcgtctggccgaggagcatcaggccatcggcttctacctctccggc
cacccgctcgacgactacatgcccgcgctcaagcgcaagcgcgtcatgacgctggccgag
atcacgaaggaggccgcccgcgcccccaaggccgccaagatcgcgggcaccgtctcatcg
aagcaggtgaggaagtccgcccgcggcaaccgcttcgccttcgtcgcctgctccgacccg
acggggctctacgaggtcacggtcttcggcgacacgctggagcaggcgggcgacttcttc
gacaccgggcagaacgtggtgatgagcgtggaggcgacggtggagggcgacagcctcaag
ctcctcgcccgctccgtcgccccggtggatgagatcgtggcggatgcgggggcggcgggc
ctgcgcatcttcgtcaccgaggaaaccgccatcggctccgtcgccacccgcctcgccgac
ctcaaggacggcccgcgccggggcagggggccggtgaacctcgtcctccgccaccccgac
ctgcccggagaggtcgagatagccctcgccgaccagtaccgcatcaccccccagatcaag
gcggccctgaaaagcgcaccgggggtggagtatgtggaggagttttag
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