Komagataella phaffii: PAS_FragB_0057
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Entry
PAS_FragB_0057 CDS
T01092
Name
(RefSeq) Exoribonuclease II, mitochondrial
KO
K19782
exoribonuclease II, mitochondrial [EC:
3.1.13.1
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppa03029
]
PAS_FragB_0057
Enzymes [BR:
ppa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PAS_FragB_0057
Mitochondrial biogenesis [BR:
ppa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PAS_FragB_0057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
AstA
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
8197498
NCBI-ProteinID:
XP_002490869
UniProt:
C4QZB5
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Position
1:complement(2763489..2766356)
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AA seq
955 aa
AA seq
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MGSSQMVLAKVPYSRARHCLELIRRQSTSPPLSNKKEGLPKKLSQLRSESLIRNMLRVTK
PDMVWRSKMFPKDTLSAQSSLNTIQNALVSHFGKVANSFKVSACLHTHISVGDVIALTPN
VGTRLAVVVQIPNSPSDPRYTLITDQGEILFLSSLSSKLRFPQVFPTKWLRNLVIPEEIS
DLPPVGNPKAALEEPVDSSLLTASSSKVNTFISAKSPTKIITKYLVNFMADAWKKLPELN
MKLEFLHNLLQSSEGPYQIGVFELLDACNRLDLNKVATMLTSGESPVNVYQKIAIEVFGE
DYTFNYLPFQNFPLGKNVQGSFESSKNINISAFLSLVLCLRKNSKLYKHSITSVGLPLEV
TIIPLPKVVEQDRILLKMKEDKTLLPELVRYIDSKVRGDTDLVQPDLYPQVINLLKDYSG
NDYSNLPLLESLIVRILRNTHKFKNDFITRSTVYELLTLLKEIELNTDPTEWSNELAKPH
TNVSETSTQEQNYYDNLEFKDTTDPLGKIRKTFNDTIYTIDGVDALEIDDGVSITENGDN
WTIRTHIADPGSRLDLDSTLSKIGFRRAYTHYFPDTNDRHIPMLPRSFVKNVELTKKGQP
VRTMCFELSYNTKKNKIESEKTQIYAALETNFVKLTYDEVDEILKGNDSFLEELSKKHDI
SKEKLSTDIHRMFTVSTNLKNHRFKKGALNFSPISKRLVKVEKVGEELSLIFDNQSFSKS
QILVSELMIATNASVGEFCARRKIPSIYRIIQSKQRAPEVIEMFRQSQTCVNVPLTQRIM
MMNFMGLSSFSSTPRPHESLGISRYCTVTSPLRRFTDLAIHWQLQSFLLNDKELLFTPAN
LDYIILHLKFKEHQIRSTMDRSKAFFTFRHLSQFKGDQQKFFKCVFLSNVSSAGTVEVSL
LDYGVRCTLKRSDEKSHPGARMIGTLKIGDIIEDAYVEDIDLLEGNLLLRSPSCI
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttctcagatggttcttgccaaggtcccatactcaagggctaggcattgcctg
gagttgattagaagacagagcacaagtcctccattatccaataagaaggagggacttcca
aagaagctgtctcaactacgaagtgagtctttgataagaaatatgttgagagtgacaaaa
ccagatatggtttggaggtccaaaatgttccccaaggacaccctaagcgcacagtcctca
ttaaacactatacagaacgctcttgtttctcatttcgggaaagttgcaaacagtttcaag
gtttccgcttgtttgcacacccatatttcagttggagatgtgatagccttaactcccaat
gtgggtaccagattggcagtagttgtacagattcctaactctccgtccgacccacgttac
actttgattactgaccaaggggaaattttgtttctttcttcgttgtcttcaaagttacga
tttccacaagtttttccaacaaaatggcttcgtaatctggtgattcccgaagaaatatct
gacctaccaccagttggaaacccgaaagcggctttagaggaaccagtggatagttcttta
ctcactgctagctcaagcaaagtaaacacttttatttctgccaaatcacccacaaagatc
attaccaaatatctagtgaactttatggcagatgcgtggaaaaagttgcctgaactaaat
atgaagttagagtttctacacaatctgttacaatcatccgagggaccatatcagataggt
gtttttgagcttcttgatgcctgcaatcgtcttgatttgaacaaagtggccacgatgtta
acatctggtgagagtccagtcaacgtgtaccagaaaatagccattgaagtctttggcgag
gactacacatttaattatcttccctttcaaaactttcctttaggaaagaatgtacaggga
tcttttgaatcttcgaagaatatcaacatctctgcatttctttctttggtactatgtctc
agaaagaattccaaactttacaagcattctattaccagcgttggactaccattagaagtt
acgattatcccacttccgaaagtggtggaacaagatcgcattctcttgaaaatgaaagag
gataagactcttttgccagaactagtacggtatattgactcgaaggtaagaggcgacact
gacttagtacaaccggatctatatcctcaagtcatcaacctgttgaaagattattctggg
aacgattattccaatcttcctcttcttgaatcactgattgtcagaatcttaagaaacact
cacaagtttaaaaatgattttatcactagaagcacagtatatgaattattgactctttta
aaagaaatagagctcaatacggatccaactgaatggtccaatgaactagcaaagccgcat
accaatgtttctgaaactagcacccaagagcaaaactattacgataatctggagtttaaa
gataccactgacccgcttggcaagatcagaaagactttcaatgacactatatacactatt
gatggggttgatgctttggaaatcgacgatggagtatcaataactgagaatggtgataac
tggacaattaggactcacatagctgatcctggttcaagactagatctggattcaacacta
tccaaaataggcttcagaagagcatatacccattatttcccagacacaaacgacagacac
attcctatgttacccagatcttttgtaaaaaatgtcgaattaaccaagaaaggtcagcca
gtgagaacaatgtgctttgaactatcttataacacaaagaaaaacaaaatagaatctgaa
aagactcagatttatgccgcattagagacaaactttgtaaaattaacatatgacgaagtc
gatgaaatattgaaggggaatgattcatttttggaggagctctcaaaaaagcatgacatt
agcaaggagaaactgagtacagatattcacaggatgttcactgtgagtactaatctgaaa
aatcatagattcaaaaaaggagctttgaatttctctcctatttcaaaaagacttgtcaaa
gttgagaaagttggggaagaactcagtctcatttttgacaatcaatcattttccaaatcc
caaattctggtgtccgagctaatgattgctacaaacgctagcgtaggtgagttttgtgca
cgaagaaagatccccagtatctatcgaattattcagtccaagcaacgtgcacccgaagtc
attgagatgttcaggcagtcgcagacctgtgtaaatgtgcctttgacacaacgaatcatg
atgatgaattttatgggattatcatccttttcatctacaccacgaccccacgaatctctg
gggatctccagatactgcacagtcacttctccgctgagaagattcaccgatttagcaata
cattggcagttgcagtctttcttactgaacgacaaggaactcctgtttacgcctgccaat
ttggattacatcattttgcatctcaagttcaaggagcaccagatacgatctacgatggac
aggtctaaggcttttttcaccttccgtcacctgagtcagttcaaaggggaccagcagaag
tttttcaaatgtgtatttctttccaatgtctccagcgcaggtaccgtagaggtgtcgctt
ctcgactatggagtccgatgtactctcaaaagatccgacgaaaagagtcaccctggagcc
cgtatgattggcactctcaagataggagatattattgaagacgcatacgttgaggacatt
gacctgctggagggaaacctactcttacgatccccatcctgtatatag
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