Komagataella phaffii: PAS_chr1-1_0025
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Entry
PAS_chr1-1_0025 CDS
T01092
Name
(RefSeq) DNA repair protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ppa
Komagataella phaffii
Pathway
ppa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAS_chr1-1_0025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr1-1_0025
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
PAS_chr1-1_0025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
8197542
NCBI-ProteinID:
XP_002489660
UniProt:
C4QVV6
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All DBs
Position
1:complement(582462..585524)
Genome browser
AA seq
1020 aa
AA seq
DB search
MLGTVPAQFRELVREEARNSQHQERKRRRRNNRKQARKEKHKVSTNTEVSESDERQKEGQ
EVIILDDELAQQLIDQEKSKSRIENEEEEEEDIDDEQFEEIDLNFQDFGDEVDPAEEMVL
TYDKEPQESKSKKGKTRRVNMVSAEERKFRRDFHLLYLIVMACYGRLRNAWCNDTSLQRF
LRLSLPQKLTDEYKIVKQNWSDSKVTVSLKTRKFLDFLRHLMWYWNSSYRITNSFMYQKR
NWGELSKEFSHEEVSREKFKYLIRSHMGSSEICLEGFVMLLRSLGLYTRLVISLQPPDFT
NVAAVDFSVSEEKKSSSPSVPKTKKVTKDDYLSLVRSGKPRSQSKSPGPINQEAPEYPVM
WAEVWDKYSQKWISIDPVVQKTIDIVGRKSKFEPPLNNKKNNCFYVIGYDQRNAVRDITR
RYASNLNSKVRRKRVTRDPRYALWWERVLRELNTPRTRHASKIDALERVEFEERDLREGM
PDSFEDFRNHPVYCLESQLKQNEILYPKQSCGTVRKKSSNEVTPVYKRLNVHTVRSPKAW
YLKGRMIKLGERCLATKDAPKTADDDEDETRLYAEFQTELYIPPPIENGIVPKNAYGNID
VYVKTMLPKNGAHITGKRAIKAAKLLGIDFAPAVVGFDFGGNNKGVANARIDGIVVAKEF
EEAMSLTCQCLQEMHEEEELMRKNIRLLKCWKIFLTKLRIKDRLNKTHGKLEETDETYEQ
GGFVASDRVFDTDKQDSKSTQDWDNYSDSSSNYVPSESSGNETDYGIGGFIPSDDVSDLG
NVNERETKLGGSTSYENEFDESGHSEVAQAGLTPRSGSELVDKNQDSLEGGFVKEDQQSA
EEGGFLLEDAESGGFLPEDAELDKAISEEIKKAKFPVETDTLSGQFVGDEEIIKQGEFSG
EQDFDIGHFQNLRDEERQGPQTHTSEELSNDEIMRSEGRCGGSSVSYATEVAESRDGDGN
QETNLTEEAMVTNIAKFQEEQQQKPVENNSTPIVIDSADEPEIATGQHLDEFDFEYSDSE
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtacagttccagctcaattcagggaactcgtacgagaggaggcaaggaatagc
caacatcaagagagaaaaagaagaaggagaaataaccgtaaacaggcacggaaggaaaaa
cacaaagtttcgactaatacggaggtttctgaatccgatgagaggcaaaaagaaggtcaa
gaggtgattatcctggatgatgagcttgctcagcagttgatagaccaagaaaaaagcaaa
agtagaattgaaaacgaagaagaagaggaagaagatattgacgatgagcaattcgaagaa
attgacttaaattttcaagattttggtgacgaggttgacccggctgaagagatggtttta
acttacgataaggaaccccaggaatctaaaagcaaaaagggtaaaacaagaagggtgaac
atggtttctgcagaagagcggaagttccggagggactttcatctgctgtacctcatagtg
atggcatgttatggtagattgagaaatgcttggtgcaatgacacttcattacaaagattc
ctgaggctctcccttccccagaagttgactgatgaatacaaaatagtgaagcagaattgg
tcggactcaaaggttactgtgtcactgaaaactaggaaatttctagactttctcagacac
ttaatgtggtattggaatagctcatacagaataactaacagtttcatgtaccaaaaaaga
aactggggtgagctaagtaaagaattttcgcatgaagaagtcagcagagaaaagtttaag
tacttgattagaagtcacatgggatcaagcgagatttgtttggaaggtttcgtaatgctt
ttgcgatctttggggctatatactaggttggtcatttctttgcagccacctgattttacc
aatgttgctgcagtagatttttcagtatctgaagagaaaaaatcctcttcgccttcagta
ccaaaaactaaaaaggtaactaaagatgattacctatctctagtccgaagtgggaaacct
cgctcacaatcgaagtcaccaggtccaataaaccaagaggccccagaatatcccgtaatg
tgggctgaagtatgggacaagtattctcaaaaatggatatccattgacccagtagttcag
aaaacaatagacatagtcggaagaaaatctaaatttgaaccacccttaaacaataaaaag
aacaattgcttttatgtgattggatatgatcaaagaaatgctgttcgtgatatcaccaga
cggtacgcttctaacttgaattctaaagtgcgaagaaaacgtgtaactagagacccacgc
tatgccttatggtgggaaagagttttgcgggagttgaatactccaagaacgcgccatgct
agcaagatcgacgcactagaacgagttgaatttgaagagcgtgacctgagagaaggcatg
cctgatagctttgaagattttagaaaccatccggtttactgtcttgagtcgcagctaaaa
cagaacgaaatcttgtacccaaaacaaagttgtggaactgtccgaaagaaaagtagtaac
gaagtaactccagtctataagcgactgaacgtgcatactgtaagatctcccaaagcttgg
taccttaaaggtcgaatgataaagttgggggagagatgcttggctacaaaagatgcgccg
aaaactgctgatgatgacgaggatgagactcgtctatatgcagagtttcaaacggaatta
tacattcctcctcctatcgagaatggtattgtcccaaaaaatgcatatggtaacatagac
gtttatgttaagaccatgctacccaaaaatggagctcacataactggtaaacgggctatc
aaagcagctaaacttttgggcattgactttgctcctgctgttgtagggtttgactttggg
ggcaacaacaaaggagtggccaatgctcgtattgatggtatagtcgttgccaaagagttc
gaagaggcaatgagtttaacatgtcagtgcttacaggaaatgcatgaagaggaagaactt
atgcgaaagaatattagacttttaaagtgttggaagatctttttaaccaagctgcgcata
aaagaccgtttgaataagacacatggaaaattagaggaaactgatgaaacttatgaacag
ggaggatttgtcgccagtgatcgtgtttttgatactgacaaacaagactccaagtccacg
caggattgggataattattcggatagtagtagtaattatgttccctcagaatcatcagga
aacgaaacggattatggtataggtggttttattccctccgatgacgttagtgatcttggc
aatgttaatgaacgtgaaacaaagctaggtggttccaccagttacgaaaatgaatttgat
gaaagcggacatagtgaggttgcacaagcgggactcacacccaggagcggtagtgaactt
gtagacaagaaccaagactcactcgaaggaggatttgtaaaagaggatcaacagtctgcc
gaagagggaggatttttgttggaagatgcagaatcaggaggatttttgccagaggatgct
gagcttgataaagcaatatctgaagaaatcaagaaggctaaattcccagtagagactgat
acattgtctggccagtttgtaggagatgaggaaatcattaagcaaggtgaattttctggt
gaacaagattttgatataggccactttcagaatctaagagatgaggagaggcagggccct
caaacgcatacatcggaagagttgtcaaacgatgaaatcatgcgctcagagggaaggtgt
ggtggaagttcggtttcatatgctactgaggttgcagaaagtcgagatggtgatggaaat
caggaaacaaacttgactgaagaggccatggtaaccaatatcgccaaatttcaagaagaa
caacaacagaagccagttgaaaacaacagcactcctattgtgattgacagtgcagacgaa
ccagaaattgctacaggtcagcaccttgatgagtttgactttgagtacagtgattccgag
tag
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