KEGG   Komagataella phaffii: PAS_chr1-1_0025
Entry
PAS_chr1-1_0025   CDS       T01092                                 
Name
(RefSeq) DNA repair protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
ppa  Komagataella phaffii
Pathway
ppa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAS_chr1-1_0025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr1-1_0025
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      PAS_chr1-1_0025
SSDB
Motif
Pfam: Rad4 BHD_3 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 8197542
NCBI-ProteinID: XP_002489660
UniProt: C4QVV6
LinkDB
Position
1:complement(582462..585524)
AA seq 1020 aa
MLGTVPAQFRELVREEARNSQHQERKRRRRNNRKQARKEKHKVSTNTEVSESDERQKEGQ
EVIILDDELAQQLIDQEKSKSRIENEEEEEEDIDDEQFEEIDLNFQDFGDEVDPAEEMVL
TYDKEPQESKSKKGKTRRVNMVSAEERKFRRDFHLLYLIVMACYGRLRNAWCNDTSLQRF
LRLSLPQKLTDEYKIVKQNWSDSKVTVSLKTRKFLDFLRHLMWYWNSSYRITNSFMYQKR
NWGELSKEFSHEEVSREKFKYLIRSHMGSSEICLEGFVMLLRSLGLYTRLVISLQPPDFT
NVAAVDFSVSEEKKSSSPSVPKTKKVTKDDYLSLVRSGKPRSQSKSPGPINQEAPEYPVM
WAEVWDKYSQKWISIDPVVQKTIDIVGRKSKFEPPLNNKKNNCFYVIGYDQRNAVRDITR
RYASNLNSKVRRKRVTRDPRYALWWERVLRELNTPRTRHASKIDALERVEFEERDLREGM
PDSFEDFRNHPVYCLESQLKQNEILYPKQSCGTVRKKSSNEVTPVYKRLNVHTVRSPKAW
YLKGRMIKLGERCLATKDAPKTADDDEDETRLYAEFQTELYIPPPIENGIVPKNAYGNID
VYVKTMLPKNGAHITGKRAIKAAKLLGIDFAPAVVGFDFGGNNKGVANARIDGIVVAKEF
EEAMSLTCQCLQEMHEEEELMRKNIRLLKCWKIFLTKLRIKDRLNKTHGKLEETDETYEQ
GGFVASDRVFDTDKQDSKSTQDWDNYSDSSSNYVPSESSGNETDYGIGGFIPSDDVSDLG
NVNERETKLGGSTSYENEFDESGHSEVAQAGLTPRSGSELVDKNQDSLEGGFVKEDQQSA
EEGGFLLEDAESGGFLPEDAELDKAISEEIKKAKFPVETDTLSGQFVGDEEIIKQGEFSG
EQDFDIGHFQNLRDEERQGPQTHTSEELSNDEIMRSEGRCGGSSVSYATEVAESRDGDGN
QETNLTEEAMVTNIAKFQEEQQQKPVENNSTPIVIDSADEPEIATGQHLDEFDFEYSDSE
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgttgggtacagttccagctcaattcagggaactcgtacgagaggaggcaaggaatagc
caacatcaagagagaaaaagaagaaggagaaataaccgtaaacaggcacggaaggaaaaa
cacaaagtttcgactaatacggaggtttctgaatccgatgagaggcaaaaagaaggtcaa
gaggtgattatcctggatgatgagcttgctcagcagttgatagaccaagaaaaaagcaaa
agtagaattgaaaacgaagaagaagaggaagaagatattgacgatgagcaattcgaagaa
attgacttaaattttcaagattttggtgacgaggttgacccggctgaagagatggtttta
acttacgataaggaaccccaggaatctaaaagcaaaaagggtaaaacaagaagggtgaac
atggtttctgcagaagagcggaagttccggagggactttcatctgctgtacctcatagtg
atggcatgttatggtagattgagaaatgcttggtgcaatgacacttcattacaaagattc
ctgaggctctcccttccccagaagttgactgatgaatacaaaatagtgaagcagaattgg
tcggactcaaaggttactgtgtcactgaaaactaggaaatttctagactttctcagacac
ttaatgtggtattggaatagctcatacagaataactaacagtttcatgtaccaaaaaaga
aactggggtgagctaagtaaagaattttcgcatgaagaagtcagcagagaaaagtttaag
tacttgattagaagtcacatgggatcaagcgagatttgtttggaaggtttcgtaatgctt
ttgcgatctttggggctatatactaggttggtcatttctttgcagccacctgattttacc
aatgttgctgcagtagatttttcagtatctgaagagaaaaaatcctcttcgccttcagta
ccaaaaactaaaaaggtaactaaagatgattacctatctctagtccgaagtgggaaacct
cgctcacaatcgaagtcaccaggtccaataaaccaagaggccccagaatatcccgtaatg
tgggctgaagtatgggacaagtattctcaaaaatggatatccattgacccagtagttcag
aaaacaatagacatagtcggaagaaaatctaaatttgaaccacccttaaacaataaaaag
aacaattgcttttatgtgattggatatgatcaaagaaatgctgttcgtgatatcaccaga
cggtacgcttctaacttgaattctaaagtgcgaagaaaacgtgtaactagagacccacgc
tatgccttatggtgggaaagagttttgcgggagttgaatactccaagaacgcgccatgct
agcaagatcgacgcactagaacgagttgaatttgaagagcgtgacctgagagaaggcatg
cctgatagctttgaagattttagaaaccatccggtttactgtcttgagtcgcagctaaaa
cagaacgaaatcttgtacccaaaacaaagttgtggaactgtccgaaagaaaagtagtaac
gaagtaactccagtctataagcgactgaacgtgcatactgtaagatctcccaaagcttgg
taccttaaaggtcgaatgataaagttgggggagagatgcttggctacaaaagatgcgccg
aaaactgctgatgatgacgaggatgagactcgtctatatgcagagtttcaaacggaatta
tacattcctcctcctatcgagaatggtattgtcccaaaaaatgcatatggtaacatagac
gtttatgttaagaccatgctacccaaaaatggagctcacataactggtaaacgggctatc
aaagcagctaaacttttgggcattgactttgctcctgctgttgtagggtttgactttggg
ggcaacaacaaaggagtggccaatgctcgtattgatggtatagtcgttgccaaagagttc
gaagaggcaatgagtttaacatgtcagtgcttacaggaaatgcatgaagaggaagaactt
atgcgaaagaatattagacttttaaagtgttggaagatctttttaaccaagctgcgcata
aaagaccgtttgaataagacacatggaaaattagaggaaactgatgaaacttatgaacag
ggaggatttgtcgccagtgatcgtgtttttgatactgacaaacaagactccaagtccacg
caggattgggataattattcggatagtagtagtaattatgttccctcagaatcatcagga
aacgaaacggattatggtataggtggttttattccctccgatgacgttagtgatcttggc
aatgttaatgaacgtgaaacaaagctaggtggttccaccagttacgaaaatgaatttgat
gaaagcggacatagtgaggttgcacaagcgggactcacacccaggagcggtagtgaactt
gtagacaagaaccaagactcactcgaaggaggatttgtaaaagaggatcaacagtctgcc
gaagagggaggatttttgttggaagatgcagaatcaggaggatttttgccagaggatgct
gagcttgataaagcaatatctgaagaaatcaagaaggctaaattcccagtagagactgat
acattgtctggccagtttgtaggagatgaggaaatcattaagcaaggtgaattttctggt
gaacaagattttgatataggccactttcagaatctaagagatgaggagaggcagggccct
caaacgcatacatcggaagagttgtcaaacgatgaaatcatgcgctcagagggaaggtgt
ggtggaagttcggtttcatatgctactgaggttgcagaaagtcgagatggtgatggaaat
caggaaacaaacttgactgaagaggccatggtaaccaatatcgccaaatttcaagaagaa
caacaacagaagccagttgaaaacaacagcactcctattgtgattgacagtgcagacgaa
ccagaaattgctacaggtcagcaccttgatgagtttgactttgagtacagtgattccgag
tag

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