Komagataella phaffii: PAS_chr1-1_0035
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Entry
PAS_chr1-1_0035 CDS
T01092
Name
(RefSeq) Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles
KO
K20471
coatomer subunit delta
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr1-1_0035
Membrane trafficking [BR:
ppa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PAS_chr1-1_0035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adap_comp_sub
Clat_adaptor_s
DUF6673
Motif
Other DBs
NCBI-GeneID:
8197552
NCBI-ProteinID:
XP_002489674
UniProt:
C4QVX0
LinkDB
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Position
1:complement(608498..610612)
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AA seq
704 aa
AA seq
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MVELSTPVDNSAIEGLQVQFLSVSYFNFLACCLIILFSNDLPPNHRAKKRYIAYDLVTTS
KSLTHPFVSLVLPILPIPSVVLKEVSSPDYSDTSTFQNCRALTNIFLSYNQFVRDSMAVL
ASSITTRDGKTIISRQFKDLSKDRITALLAEFPSLLSENSKYQHTSIEYEGVRFIYQPLE
NVYVVLITNRQSNVLQDIDTLHILSQSLSALLRSVEEKEVLDNCFEIISAFDEVINLGYK
ENLSLNQVRAFLEMDSHEEKIQEIIERNKELEAAEERKRRAKEIQRKELARRNREDYANM
IPQQHSSAFDQQPQQPIYSNFEAPSAPSEYESYNPTTPSTRSAPPRGKGLKLGKKSGSSE
AQQPLLVPQRHLESQFNSHQQQTPLQQNHPHQQPQRYQQSPPQQAHRSPVPESVSSIPPA
HNVVSPHTGQNVQRQIPHEASTTRSPVSRPQVGKPINNGIMVTIIEKVSGKVNRDGTVLS
SELKGDLQLRINESSLAHGVIHLGLAKQPNTQFKTHPNVDKNLFNAESKIGLKDPRKSFP
ANDQSLGVLRWRSVGSGLLPLNVSSWINSNDDGSVSVTIEYEVNEKLAFNEYSIDDAELV
IPLSGLSFSIDNPENVSVDNKGDSTSVFLTRLNEHPSGSFEFEVSNVDEENVFPIHVNID
LQNNFDNLSDVKVNSINSLDLETLNEELPYDLYYNLATESFTIE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggtagagctttcgactccagttgataacagtgcaatcgaagggctgcaggttcaattc
ctgtccgtgtcatactttaactttttggcatgttgtttaattatacttttttccaacgat
ctgcccccgaaccaccgagcaaagaagaggtacatagcgtatgacctcgttactacttcc
aagagtcttactcacccttttgtttccctggttctccccattctgcctatccctagcgtt
gtacttaaagaggtttcgagccccgattattcagacacgagtacatttcaaaattgtcga
gcattaaccaacattttcctttcctataatcagtttgttagggacagcatggcagttcta
gcttcttcgatcaccactagggatggaaagactatcatctctaggcaattcaaagatctg
tccaaagaccggattaccgctttgttggctgaatttccgtcacttttgtcggagaattca
aaataccagcacacatctatagaatacgaaggagtgagattcatttaccagccattggaa
aacgtttacgtggtattgattaccaaccgtcaatcaaatgttctgcaggatattgataca
ttacatattttgagtcaatcattgtcagcactcttgagatcagtagaggagaaggaagtg
ctggacaattgtttcgagattataagcgcttttgatgaggtgatcaatcttgggtacaag
gaaaatctatccttgaaccaggttcgtgcattcttggagatggattcccatgaagagaag
attcaggaaataatcgaaagaaacaaagagttggaagccgctgaggagagaaagagacgc
gccaaagaaatccaacgcaaggaacttgcaagaagaaatagggaagattatgcaaacatg
ataccccaacagcattctagtgcatttgatcaacagcctcaacaacctatctattcaaac
tttgaggctccttctgctccttccgagtatgaatcctataacccaaccactccttccact
agatcagcaccaccaagaggaaagggattgaaattgggtaagaaatccggtagttctgag
gcgcaacagcctttgcttgttcctcaaagacacttagagagtcagttcaatagtcaccaa
cagcagaccccactacaacaaaatcatccccaccaacaacctcagcgatatcaacagtca
ccaccacaacaagctcatcgttctcctgttccagaatccgtttcttcgatcccaccagcc
cataatgttgtctccccacacacgggccaaaatgttcaaaggcagatacctcatgaagca
agtacaactaggtccccagtatcgcgtccacaagttggaaaacctatcaacaatggtatt
atggtcaccatcattgagaaagtttctggtaaagtaaatagagacgggactgttttgtcc
agcgagcttaaaggggatctacagctgagaattaatgaaagttctttagctcatggcgtg
atccatttgggattggcaaagcagccaaacacccaattcaagactcatccaaatgttgat
aaaaatctattcaacgccgagtccaagattggtttgaaagatcccaggaagtcttttccc
gccaatgatcagtccttgggagtactgagatggagaagcgtcggtagcggtttgttacct
ctcaacgtttcatcatggattaatagcaatgatgatggtagtgtctcggtgacaatagag
tatgaggtcaatgaaaaattagctttcaacgaatactctattgatgatgccgagctagtt
ataccattatcaggtctttctttcagtattgataacccagagaatgtttcagttgacaac
aagggggattctacctctgtgtttttgacgagattaaacgaacatccctcaggatccttc
gaatttgaagtttccaacgtcgatgaagagaacgtcttcccgatccatgtcaatattgac
ctgcaaaacaacttcgacaacctgagtgatgttaaggttaatagtatcaacagtcttgac
ttggagacattaaacgaggagctgccatatgacttgtactacaacctggccacagaatca
tttactatcgaataa
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