Komagataella phaffii: PAS_chr1-1_0211
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Entry
PAS_chr1-1_0211 CDS
T01092
Name
(RefSeq) Putative vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr1-1_0211
Membrane trafficking [BR:
ppa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
PAS_chr1-1_0211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
8196714
NCBI-ProteinID:
XP_002489861
UniProt:
C4QWF7
LinkDB
All DBs
Position
1:965178..974564
Genome browser
AA seq
3128 aa
AA seq
DB search
MLESLAANILNRFIGAYIENFDNNKLNIGIWSGDVKLRDLRLRKESLDELRLPIDVQFGH
LGELTLQIPWSNLKSKPVKIVIDSVYLLATPNDPSKFDPEEQERRAQKLKQDKLDQLEML
ANSKPMKSDEDERELDQQGIEKNESFVESLLTKITDNVQVTIKNIHVRYEDFDVFTNRPY
SVGFTLGELSAVSTDSNWVPNFISSITLYTHKLLTLDSFALYWNTETTSISDPDPEVLLG
RFKESLDNRSDHQYILEPVSGLGHVTLNKVGTTETAPHVALKLFFEEFGVNLDGDQYRDF
LWTASQYHLYLKTRKFRKLRPKCTVKEDPLKWMQYTAKCILQEVHEKNRKWSWKYFESRR
DQRKLYIKLWKEKLEGKQLIDDKLEQFEKLEYELSYPDIRFYRSLARREFRKEKATSPSN
TLSNQTEKNTSGGWLSMIWGPSKKDTQVDESKDQLELTEEQRKELYDVIDFDEKQAITEA
VEIPKDRVKLEVSSVLQKGFLAIKRTQTSKNLCEVVFEGCYSEFFQRPDSFLARFQLDEL
RVEDGTENTLYKHIVNVKPLGDPEVVAHTPEGKREPFFQLAFENNPLDGSADSSLTARMK
SMTIFHNPKLIEDVARFFTPPKIHLETVGAIINAAESTLEDFTMQTRIGLQYALEEHKTI
NLKLNMQSPLIIIPLDPSSWKSPVAVLDAGHISVTSDLVDPSKYQEVTDKVSKQYDDNDW
KTLKDLMYDKFTLKIQDAQVLVGQNIKSTISQLHGNSSNVSATILDNLNMNFSLGVSIAQ
SVISLPRFKIGGDVPRFRVALNNFQYKVIMQLLENAIPDLDNISEDAETTKENGFSVANN
NESTEKFSYEVPDDVSSAGSDDKPTVSTQKLFVFNFTLDTIEVSLLRCDDASTFVSETLI
RIIGKKVQLDLFKTSKQLHVDLSLLDINVEDFIEQSGENEFKYLLSSDNFEEHEVVNKRG
NLFTLSYDKTQRIVPLNGEQIICFDQDIDLNIADVKFVITRRSILTLLNYALNTFTDVNP
PETPADQLRHNDDTEQMLAPETINVRIKMDSIIAVLNDDGIKLATTKLSEADIGIVVFPE
RLKVSAKIGGLSLFDEVNEGVSRSSVLRNLISFEGNDLAELEYETFDPAINSKEYSATLK
LRTGSMKIVFVEGPFNNIIKFLSQFQRMKYIYDNARDAALNQASSIDNSTKILFDVLIKA
PTVVLPKAIDPTNDRFETITAFLGELYASNKFIEERSNVVQLIDLGIRSTKVTSKFYTKD
QREQLFEIIDKLELKLHLNYCDEYIKERPICVVNGGLEGSEMNLTELQCRYIMELMAVIP
KVFQFDSDYEDENFEALRNDAENMNKEIRGTNVERVEEEQPKSAEKEVIPSDHTKLDFTF
DVAQIALTIYDHTDMVTSLDKSSLSQISLNDTHLLFTLKENNDFSSELRTRSFIVEDSRE
IKDNKFTKILSTAQDSDYQFMASAFSKAGSKSATLAIDSPKTILALDYLVALKSFVDTGF
ISSANPALQNVQLSTMSNESPEEEESESVSVESQDQLAVKQDENEEAFKFTINVVDVSVI
LLADPSLDTTEAIVFNVEQMLFDSHRTQSLSLKNIGMFLCRMDQFDTNRLRILDNFSTSL
TVDDRNSSELNRLTSIKLHIDPLLLRLSVRDIRLAISIVNKAIDLMGQQDKEPDKSTTAP
GVQYISFTKEFKRKLSQYAPTIISTISQTSVRSYKVKNKAQVVVRDESLVANFEGLRCVL
IGDVYELPVLDMNVKPFDVVAKNWSTDLEAFSNLESFVNIFNYSSSAWEPLIEPWPLGFH
VKKSRKLAKGDSDKFVVNISSTDKAEITMTSRSLALLNQVATFLTDDIPLQPRGENSPYR
ILNHTGYNIKVWIEGSESNRLTSIANGDEVSWVFEDWRTLRESLSVDSMKGFIGIELEDS
PYEKLQQVSLQTIGEEIFTLQPARGNFHNRLVVTITLGEDSVKHVVIRSTVKVTNTTQVK
IRIGLNSDPKSSVPQKSFTINPDETYAIPIDNVLNDSIFVKPEGLDSSFGWSSNSTTWKT
LRNETVSFACTEEEGKERANFYFQAYAIVNENYALAKVYPQMEIVISPPLELINLLPYDL
SYRIYDKSSKKDWRNFLKQGNSSAVHVVKLDHFLLLSLKPLDCGIDKSDFCIINSPKNSD
FKPETRVTTRGTDGQRLHLNLHYSKIHSDYAGVKITIFSPYVVLNRTSEDLFLSEGYNTM
KSFVSDSQTDKHRLVKKALPKMFSFDRDNWNGNRATIRLSDSEVSRKVGLDTVGQSVNVD
VPCNTRGYEKNLSVTIGEGSGKYWLSKVVTVAPRYIFTNKIESTVILQEYGTGKQLKVRP
GSSIPLYNLRTGRKKQLTLGLDDGSTQLSSPFNINDIGEIYLKILKHNNDYILTKINILL
ENGSLFITIIDANGKWPFSMRNFSDSEFIFYQSNPMINEEGILEDPSYRFKPIYYRLPPK
SVMPYTWDYPAGSMKELIIRSHNAERHVQLQEIGSLKPMVLPATSTEEKSIVDLNVVADG
PTQSLVISNYDSSKSMYKLHSKSESSTTVADKFETIDSENDYFFQLIVNLEGAGFSFINN
RQQELCYLTLRSLEVRYNESDIYQNLSFKLKWFQLDNQLYGGIYPIVLYPSVLPNSNKDI
NNHPAWSASISKVKDESHGVTLIKYATILLQEFTLEIDEDFLFAVLDALKVPGKAKVEDK
LCDNDLDLPTLDKNVSDSDIYFEALHFQPMQMNLSFVRTEHINADEVSNSDNALSFFLNI
LTMAIGNINYAPVRLNALLIENVRVPVPLLLQLIQTHYGQAFLYQVYKILGSADFLGNPV
GLFNNLSSGFLDIFYEPYMGFVMNDRPQELGIGLAKGSLSFVKKSVFGLSDSFAKFTGSM
AKGLTAATLDTSFQERRRLNQRRNKSKHGFLGFSAGASSLFESVSSGITGLTDAPSQGAA
TDGASGFLKGIGKGLIGLPTKTAIGFFDLASNVGEGIRSTTTAFDGEGIEKVRLPRFVAQ
NSPISPYSERDAQGQFWLKSANGGQFFNDKYLTHAVLPGGEYVVVISYTHIILVSIADLS
VSRSIEMKQIKSILVDSTGLQIKLTERDSKSEATEMFIPLPEQKTRREVYQKLSIAVQDF
NKRCQVIL
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtctttggcagctaacatccttaacaggtttattggcgcctacattgagaac
tttgacaataacaagcttaacattggaatatggagtggagatgtcaagctgagagatcta
agattgcgaaaagagtcccttgatgagcttcgattgcccattgacgtccaatttggccat
cttggagagcttactcttcagattccatggtcaaacttgaagagcaagcctgtgaagatc
gttattgacagcgtttatctactggccacgccaaatgatccttcgaagtttgatcctgaa
gagcaagagagaagggcgcagaagctcaaacaagacaaattggaccaattggaaatgttg
gccaactccaagcctatgaagtctgatgaagatgaaagggaattggaccagcagggtatt
gagaagaatgaatcttttgttgaaagtttactgacgaagatcactgataacgttcaggtc
acgatcaagaacatccatgttagatacgaagattttgatgtgtttaccaacagaccttat
tcggttggttttactcttggtgaattgtccgctgtgtctacagattccaattgggtaccc
aacttcatatcttctattactttgtacacgcacaaattgctcactttggactcgtttgct
ctttattggaataccgaaacaacttcgatttcagatcccgatcctgaagttttgctcgga
aggtttaaagagtcattggacaacagatcagaccatcaatacatactagaaccagtctct
ggattaggccatgtaaccttgaataaagtgggaacaacagaaacggctcctcatgttgct
ttgaagttgttttttgaagagttcggggttaatctagatggtgatcaatacagagatttt
ttgtggactgcatctcaataccacctgtacctgaaaactaggaaattccgcaagttgcga
cccaaatgtactgtcaaggaagatccattgaaatggatgcaatatacagccaaatgcatt
ttacaagaggttcacgagaagaaccgcaaatggtcctggaaatattttgagtccagaagg
gatcaaagaaagctatacattaaattatggaaggaaaagcttgaagggaagcaacttata
gatgacaaacttgaacaattcgaaaaactcgagtatgagctgtcttatcctgatataagg
ttttatagatctcttgcaagaagagaattcagaaaggaaaaggcaacttcgccttcaaac
actttgtcaaaccaaacagagaaaaatacttccggagggtggttatcaatgatatggggt
ccttccaaaaaggacacccaagtcgacgaatctaaagatcaactggaattgacagaagaa
caaagaaaggagctctatgatgtgattgactttgacgagaaacaagccattaccgaagct
gtggaaattccgaaggaccgcgtcaaattggaggtatcttcagttttacaaaaaggattt
ctcgcaattaagaggacccaaacctcaaagaatctatgtgaagtagtatttgaaggttgc
tattccgaattctttcaacgcccagactcctttttagccagatttcagcttgatgaattg
cgcgtagaagatggtactgaaaatacactctacaagcatattgtcaacgttaaacctttg
ggagaccctgaggtggttgcacacacccctgaaggcaaacgagaaccctttttccaacta
gcgtttgaaaataaccccttggatggatccgccgattcatcattaactgctagaatgaaa
agtatgacaattttccacaatccgaaactgatagaggatgttgcaagattttttacacct
ccaaaaattcatttagagacggttggtgctataatcaatgctgcagaatcaactttggaa
gatttcacaatgcaaactagaattggactacagtacgcattagaagagcacaaaacaatc
aatttgaaattgaatatgcagtcacccttgattattatacctttggatccttctagttgg
aaatccccagtggcagtcctagacgcgggacacatttctgttacaagtgatttagtggat
ccgtcaaaatatcaagaagtcacggataaggtttccaagcagtatgatgacaatgactgg
aaaacattaaaggacctaatgtatgataagtttactttgaaaattcaggatgctcaagtt
ttagttggacaaaacatcaagtcaaccatttcacagctgcatggaaactcgagtaatgtg
tcagcgacaattttggataatttaaacatgaacttttcgcttggagtttcaattgctcaa
tctgtcatttctttaccgagatttaagattgggggagatgttccaagattcagagttgct
ctcaacaactttcagtacaaagtgatcatgcaactgcttgaaaatgcgattcctgacctt
gataatatctccgaagacgctgagaccactaaagaaaatgggtttagcgttgcaaacaac
aatgaatctactgaaaagtttagttatgaggttcccgatgatgtttcgtctgcgggttca
gacgacaagcctacggtgtctacccaaaaattgtttgtatttaactttactctagacacg
attgaagtttcattgttgagatgcgacgacgcttcaacgtttgtttccgagacactgatt
cgtataatcggaaagaaagtacaattggatctgttcaaaacatctaagcagcttcacgtt
gatctttcgctattagacatcaatgtggaagactttatcgagcaatcaggagaaaacgag
ttcaagtatctactatcctccgataattttgaggaacatgaggtagtcaacaagaggggc
aacctgtttactttaagttatgataaaactcagagaatcgtacctctgaatggcgagcaa
attatctgctttgaccaagatattgatttgaacatcgctgacgttaaatttgttattaca
agaaggtccattctaacactactgaactacgctctgaatacgttcaccgatgtcaatcca
ccagaaactccagccgatcaattaagacacaatgatgacactgaacaaatgctagcacct
gaaacaataaacgtccgaatcaagatggatagcataatcgctgttctaaacgatgatggg
atcaagcttgccacaacaaagttaagtgaagctgatattggtattgtagtcttccccgaa
aggttgaaggtcagcgcaaaaattggaggactttctttattcgacgaagttaatgaaggt
gtttctagatcttcagtcttaagaaacttgataagttttgagggtaatgaccttgccgaa
ctggagtatgaaacctttgatccagctataaactccaaagaatacagtgctacattgaaa
ctccgtacgggctcgatgaaaattgttttcgtagaaggtcctttcaacaacataataaag
ttccttagtcaattccagaggatgaagtacatctacgataatgctagggatgccgcattg
aaccaggcaagcagtatcgacaatagtacaaaaatactatttgatgttcttattaaggct
cctacagttgtattgccgaaggcgatagatcctacgaatgatcgttttgagacaattact
gctttcttaggagaattatacgcttccaataagtttatcgaggagcgatcaaatgttgtt
caacttatagatctaggaataagatctactaaagtgacctcaaagttctacactaaagat
cagagagagcaattgtttgagatcatagataagcttgagcttaaacttcatctgaactat
tgcgatgaatatataaaagagagaccaatatgtgttgtgaacggcggattagaaggaagc
gagatgaatttgaccgagttgcaatgtcgctatatcatggaattgatggctgtgatacct
aaggtgtttcagttcgattctgattatgaagatgagaattttgaagcactgagaaatgat
gctgagaacatgaataaggagattagaggcactaatgtggaaagagtagaggaagaacaa
cctaaatctgcggagaaagaagttataccatctgatcatactaagttggatttcacattt
gatgtcgcacaaattgccctcactatatatgatcatactgatatggtaacatctttggat
aaatcgtctctttcccagatttctctcaatgacactcatctgttgttcactttaaaagag
aacaatgattttagctctgaactgcgaacaaggtcgttcatcgttgaagactctcgtgaa
attaaggacaacaagtttacgaagatattgtcaacggcccaagatagtgattatcagttc
atggcttcagcattctctaaagcaggtagcaagagtgctacattggctatcgacagtccc
aaaacgattcttgctcttgattatctagttgccttgaaatcttttgttgatactgggttt
atttctagcgccaatcctgcgcttcagaatgttcagttatcaacaatgtccaacgaatca
cctgaagaggaggaatctgaatctgtctctgttgaatctcaagatcaacttgctgtgaag
caagatgaaaatgaggaagccttcaagttcactattaatgttgttgatgtatcggttata
ctgttggcagatccaagtctggacacaacagaagccatcgtgtttaatgttgagcaaatg
ttgttcgatagtcatcgtacccaatctttgtctttgaaaaatattggtatgtttttgtgc
aggatggatcagtttgataccaacagattgagaatcttggataacttttcaaccagtttg
acggttgatgaccgtaattctagtgaattaaatcggttaacaagcatcaaactgcatatt
gacccccttcttttgagactttccgttcgtgatatccgactagcaatttcaatagttaac
aaagcaattgatctgatgggacagcaggataaagaaccagacaagtccacaaccgcacct
ggagttcagtatatttctttcacaaaagaattcaagagaaaactatctcaatacgctccg
actatcatctctactatttctcaaacgtcagtccgttcctacaaagtcaagaataaggca
caagttgttgtgagagatgaatcactggttgcaaattttgaaggtcttcgatgtgtgttg
ataggagatgtttatgaacttcctgtactcgatatgaatgtcaaacctttcgacgtagtt
gccaagaactggtcgacagacctagaggctttttcaaatttggagtcatttgtaaacata
ttcaactattcgagttcagcatgggaacctctcatcgagccttggccattgggctttcac
gttaaaaagtcacgtaaattagccaaaggagattccgacaagtttgtggtgaatattagc
tccacggataaagccgagatcacgatgacttctagatctcttgcattgctgaaccaggta
gcgacttttttgactgatgatatacctctgcaacctcgaggtgagaacagcccttacaga
atactcaaccatacaggctataacattaaagtttggattgaagggtctgaatcgaacaga
ctcacctctattgccaatggagatgaggtttcttgggtatttgaagactggagaacattg
cgtgaatctctttcagttgatagcatgaaagggttcattggaattgagctggaagattcc
ccgtatgaaaagctgcagcaagtttcgttacaaactataggagaagaaatattcacatta
cagccagcaagaggtaattttcacaatcgtttagttgtaacgatcacccttggggaagat
agcgtgaagcatgttgtaattcggtccacagttaaagtcacgaatactactcaagtaaaa
atccgtatcggtcttaactctgacccgaagtcaagtgttcctcagaagagcttcacaatc
aatcctgatgaaacttatgctatcccgattgataatgtcctaaatgattctatttttgtt
aaaccagaagggttagactcatcgtttggttggtcaagcaatagcacgacgtggaagaca
ttgaggaatgagactgtatcttttgcttgcactgaagaggaaggaaaagaaagagcaaac
ttttatttccaagcttatgctattgtaaacgaaaactatgctttagcaaaagtttatcct
caaatggaaattgttatttcgccaccattggagcttattaacttactaccctatgactta
tcttatagaatttacgacaagagctcaaagaaagattggagaaattttttgaaacaaggc
aactctagcgctgtacatgttgtcaagttggatcactttttgcttttgagtttgaaacca
ttagattgcggtatagacaagtctgatttctgtatcatcaattcaccaaaaaacagtgac
ttcaaaccggaaaccagagtaacgaccagaggtacagacggacaaaggcttcacttaaac
ttgcactattcaaagattcacagtgattatgcaggggtaaagataactatattttcgcct
tacgtggtgttgaatcgaaccagtgaagatctgtttttgagtgagggctataatactatg
aagtcttttgttagcgattctcaaactgataagcatagattggtaaagaaggctttacca
aaaatgttctcttttgatagagacaactggaatggcaatagagctacaatacgactttca
gattctgaagtcagtagaaaggttggccttgacacagtgggccaatctgttaacgttgat
gttccatgtaatacgcgaggatatgaaaagaatctcagtgtgaccattggagaaggttca
ggaaagtattggcttagcaaagtagttacagttgcaccgagatatattttcacaaacaaa
attgagagtacagtcatccttcaggaatatggtactggaaaacagttgaaagtgagacca
ggatcttcgattcctctctataatctaagaacaggacgtaagaaacagctcacgctagga
cttgacgacggaagtactcaattgtcctcaccttttaatatcaacgacattggtgaaatt
tatcttaaaattctgaaacacaacaatgattacattctcaccaagatcaatattttactg
gaaaacggatctctgttcataacaatcatagatgctaatggtaaatggccattttcgatg
aggaacttcagtgattcagagttcatattctaccagagtaaccctatgatcaatgaagag
gggattctggaagacccaagctaccgattcaaaccaatatactacaggctgccaccaaag
agtgttatgccttacacttgggactatccagcaggttcaatgaaggaattgattatccgc
tcacacaatgctgagagacatgtgcaattacaagagataggaagcttgaaacccatggta
ttacctgctactagcaccgaagaaaagtccattgttgacttgaatgtagttgccgatggt
ccaacacaatcgttagtgatttccaattatgattcatcgaagagtatgtacaagctgcat
tccaaatcagaatctagcactacggtcgctgataagtttgaaacaattgactcagaaaac
gactacttttttcaacttattgtcaacttggaaggtgcaggcttttcttttatcaataac
aggcagcaagagttatgctacttgaccttaagatcgttggaagtacgctataacgaatct
gatatctatcaaaatttgagtttcaagttgaaatggtttcaactcgataaccaactttat
ggagggatatatccaattgtgttatatcctagtgtgttgcctaactccaacaaagacatc
aataatcatcccgcttggtcagcctccatatcaaaagtcaaggatgagtcgcacggtgtt
acgttaatcaaatatgctaccatattattgcaagagtttacgcttgagatcgacgaagat
ttcttgtttgcggttttggatgcccttaaggtgcctggtaaagctaaagttgaagataaa
ctatgtgataatgatttggatttgccaacattggataagaatgtttctgatagcgatatt
tattttgaagctcttcatttccagccaatgcaaatgaacttgtctttcgttcgtacggag
catatcaatgctgacgaggttagcaactcagacaatgccttgtcgtttttcctgaatatt
ttaaccatggccataggaaacatcaactatgctccagtgaggcttaatgcccttctgatt
gaaaatgttcgtgtgccagttccattgttgttgcagcttatccagacccattatggccaa
gcattcttgtaccaggtgtacaagattctaggatccgctgatttcctgggtaatccagtt
ggtttgttcaataacctaagttctggattcttggatatattttacgaaccttacatgggc
tttgttatgaatgaccgaccacaggagcttggaataggattagcaaaaggaagtttgagt
tttgtcaaaaaatctgtatttggactaagcgatagctttgcgaaatttactggttctatg
gctaaagggcttacagctgccactcttgacacatcttttcaagagcgacgtcgtcttaat
caaaggaggaacaaaagcaaacatgggttccttggtttttcagcaggtgcatcttctttg
tttgagagtgtatctagtggtattactggccttacagatgcaccatctcaaggcgctgcg
acagacggtgcttctggattcctcaaaggaattggaaagggtcttatagggttaccaacg
aagactgccattggattttttgaccttgcttccaacgttggtgagggtattagaagcaca
acaacggctttcgatggtgaaggcatagagaaggtgaggttacctaggtttgtcgctcag
aactctcctatcagtccttactccgaacgcgatgcccagggtcaattttggcttaaatca
gctaatggaggtcaatttttcaacgataaatatctaacccatgcagttctacccggagga
gaatatgttgtcgtaatttcctatacacacattatcctggtttcgatagcagatctttct
gtttctcgaagcattgaaatgaagcagattaagtccatcttagtcgacagcacagggttg
caaatcaaattaacagaaagggattccaaatccgaagctaccgaaatgttcatacctctt
cctgaacagaaaactagaagggaagtttatcagaaattatcaattgctgtacaagacttt
aacaagagatgtcaagttattttatga
DBGET
integrated database retrieval system
