Komagataella phaffii: PAS_chr1-1_0349
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Entry
PAS_chr1-1_0349 CDS
T01092
Name
(RefSeq) Essential protein involved in rRNA processing and ribosome biogenesis
KO
K14545
ribosomal RNA-processing protein 7
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAS_chr1-1_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr1-1_0349
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PAS_chr1-1_0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Rrp7
RRP7
PH_FT_C
Motif
Other DBs
NCBI-GeneID:
8196612
NCBI-ProteinID:
XP_002490006
UniProt:
C4QWV2
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All DBs
Position
1:complement(1211695..1212615)
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AA seq
306 aa
AA seq
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MFTLLDINIFSLISLTPTLYQVHTMELASVQEIKGFVVLPVLFHAPSGKVPKAAHYIYIK
KHSSKDEGLSSRSLFIVNIPLGSGLATLKQFFGKHATGAIIESFVECKKDSSINLAKLTS
DLVTHKQSPFPHLPNHCSLITFIDQDACDLAYQCIKKLVKSSRCPVWTLADPLGSARYRK
LAQSHILDIAQLNRSIFQDMSEFNRREETSYEELSKLGSTVDEDGFITVVGPHKKTRDEI
LGRVKTNNSEILAQAQEKMKKKEKQDFYKFQIREKKKLEMNDLLKKFKDDQEKIKVMKER
KRFRPY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgttagacatcaacattttttctctcatttccctcacaccgacactttac
caagttcatacaatggagttggccagcgtccaagagataaaagggtttgttgtgcttcct
gttctgtttcacgcacccagcgggaaggtacccaaggccgcacattacatttacataaaa
aaacattcttccaaggatgaaggattatcttccaggtcccttttcatagttaacattccc
ttaggatcaggattagccaccttaaaacagttttttgggaaacatgccacaggcgccata
atagaaagttttgtagagtgcaagaaggactccagcataaatttagccaagttaacctca
gatttggttactcataaacaatctccatttccacatctcccaaaccattgttctttgatc
acattcattgaccaagatgcttgtgatttagcttaccaatgtatcaaaaagcttgtaaag
tcatccagatgccccgtgtggactttggctgaccctctggggtctgcaagatataggaaa
ctggcccaatctcatatattggacattgcccaattgaacagatccatcttccaagacatg
tcagagttcaatagaagagaggaaacaagttacgaggaattgagtaaattaggatccacc
gtagatgaagatggtttcataacagttgttggaccccacaagaaaaccagagatgagata
ttgggtagggtcaagaccaacaactctgagattcttgcccaggctcaggaaaagatgaag
aagaaggaaaaacaagatttctacaagttccaaatccgagagaagaaaaagctggaaatg
aacgacttgttgaaaaaattcaaggacgaccaggagaagatcaaggtgatgaaagaacgt
aaacggttcagaccgtactaa
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