Komagataella phaffii: PAS_chr1-1_0383
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Entry
PAS_chr1-1_0383 CDS
T01092
Name
(RefSeq) Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ppa
Komagataella phaffii
Pathway
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr1-1_0383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppa03041
]
PAS_chr1-1_0383
Spliceosome [BR:
ppa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PAS_chr1-1_0383
Complex C
U4/U6.U5 tri-SnRNP related factors
PAS_chr1-1_0383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
C2H2-zf_KIN17
zf-DBF
zf-C2H2
zf-C2H2_4
HI0933_like
Motif
Other DBs
NCBI-GeneID:
8196644
NCBI-ProteinID:
XP_002490041
UniProt:
C4QWY7
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Position
1:1272240..1272833
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AA seq
197 aa
AA seq
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MAEPTLNQYGRRSWNKEEYAKAALDRKRKLKEAKLNPPKDRDIDDYIKERKEILLKADTL
NRISLISADQATVSKRGKNAGFYCEYCNLTYKDNLQFIDHLNSKPHLVKAGFGTNNNSSK
EITLEMIKQRIEQLNIKRSENMFESEDVQLNVREMIAKRKALEEEETKRKKERRRIKRQK
KAQEVEHVFGFKSTKQT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccaacgctgaaccaatatggtcggagatcttggaataaagaggaatatgct
aaagcagcactagacaggaagaggaagctgaaggaagcaaaattaaatcctcctaaggat
cgtgacattgatgattacataaaagaaagaaaggaaatcctactaaaggcagatactttg
aacagaataagtctaatatccgcggatcaagcaacagtcagtaaacgggggaaaaatgcc
ggattctactgtgaatactgtaaccttacttacaaggataatctccagttcattgatcat
ctgaacagtaaacctcacctggtcaaggctggctttggtaccaataataattcttcaaaa
gaaatcaccttggaaatgataaagcagagaatagaacagctcaatatcaaaaggagtgag
aatatgtttgaatctgaagatgttcaattgaatgttagagaaatgattgctaagagaaag
gccttggaagaagaggagaccaagagaaaaaaagaaaggcgtcgtatcaaaaggcagaaa
aaggcccaagaagtagaacatgtttttggcttcaaaagcacaaaacaaacctag
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