Komagataella phaffii: PAS_chr1-1_0443
Help
Entry
PAS_chr1-1_0443 CDS
T01092
Name
(RefSeq) Component of the small-subunit (SSU) processome
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr1-1_0443
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PAS_chr1-1_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
8196572
NCBI-ProteinID:
XP_002490101
UniProt:
C4QX47
LinkDB
All DBs
Position
1:complement(1371736..1379406)
Genome browser
AA seq
2556 aa
AA seq
DB search
MAKKKNTNESSRRYQFRSFRDHIESIKIEPTLKLSKRSFDYADVSHFLSALNHWRELNAT
SSFIDLVDEVTPISQTLPQLLYHKDAIFNALERSLQTNQALGLRPVLEMTAQLCHDLSED
FLEYYERIMKVLRDLSVKQTDAACLEWIFDCIAFIFKYLVKYLSQNLIPTFRYLTPLLEN
DTKRYNVVFSSQALSFLIKKAAPNALKDLIKFSFEEPKKMKTFHKTYFEALVIMYSESMK
GVSGSLHSKSDQILAALVSYVVTEPEHDMATTVLCDTLSNVLRHTNTREQARGLNELILV
QLNEVLDKNEPLESYVYCSFVRILTVLVYTDNGSKISNWTKILQTAERVIEFSSNNEEKR
FCQLSLNLYAVLLRNCEMSDMAKYYRQLFSRALSFKCSLFLPFIELCLSLNVQKTVALSN
AYLQQFMTENWRTSTKEITYFIHKISEMNLLSMAADNHGFLNSRFSITFSPELPHHLVAQ
LCLDDESDEAIYENLWRLRLLNLTGSKIDPKLVHIVRKVFDASFRSNSTLSKEIIGLTLK
TLSRVDLDSETMGHVVKKLLGCADSHKTNVHYLEGATEFLSGLRNEVPLEMLNDNQLSLI
QSFCTNCSLPYHEVRKSTLKLIIVILLKINDTEQTVSLLRKCLLIEDIPLSFESSRDIQL
RLRNLASDYSSSPPNYLSDIVVLRFFFGQLANKFSPSWKVIWEVFPKIAAKNCKYVWELA
YYFLKDPQNHTAEVEADDSFDFLGRQEEAFSHHSTNPWSTISDTRFAKFSNASAQFFSSY
ENISFSLLNTLVYTPDDFNGIFSMRSQVLKTLITFPSLPQEHSIDLVPFLLNKFEEDCEL
KMGKYQVFSAADKALLLDLFTEFPELKSIEYSDRIYHYALNLLTSRDDRRQRLALKCIFA
FKNKHIEKYRDNLENLIDDTSFKDEIFRLVSKNQDSNLLEEEDIDYVIPLVLRILYGKLQ
TAKGSDSKEGKKNAVLSILPNLQKRHIIYFLSLGHENIDSESFFRDQKVNTHTVSEKSLK
QQVGFVNMLQAVASTLGEPYTEALGYSVKPLVYSLSLAQTLVQTKKDDVKDESEVQIEKL
AKTLRQSAMNCLRKFFLVLDPQVFSWDEYFPLIFKFILKERLLKILPENSRQASSILKIL
CLWSGDNYYHYLFTEDFLPLRAVLSLLDTEYFNCQVLKMVLNFVKTMISRVVPDDVYIEA
ISLIVEAVLKVLAPLLEKIEEPPILTLGIDVLLILVENDYVNDLQIKTQLIEAVTAVLNK
QKLQIDQLDRIRVYQTLASLVANIASTIEEINPLYQVISKAYEIETQNDIRLMIGSVFMK
LQGEYEELYPVGDLVNSLNAHGPNSDKDIDYPTRLRAFRRINEDLFLSLTQLQWLPILYN
SLYFIDHAEELSLRSNSSFTLRRFIECYSLKETIEAAQPLIQILKAVVLPHLKEGLLNEN
ILVRTEYIGVLRSIVSVSHHFDELNDLKVLIAQTEESSVFNSVQFAELHESDEDKVDFFS
DIVNIQTYCRFSALEKLRKHRQDLYVDNLYEYILPVIETVCFSKDEKHEQLAIEAIDTMG
YLSVVLKWSQFKLLIRKHLARLKREVTVDGLRNNINIVVALSKSMFQSVENYKKGDNLLT
FKEYPTDAELEFFVKRTLLPSMISRLGVSSIQEDEEQNTASIRVPLSLGMVSAVMCLDEQ
SMIAELPGVLTGICQQLRCKIESVRDAVREYLGRIAVLLGASHFKFIIKELKGALSRGAH
VHILSYTLYHLMVHMTKNDHLAHGDMDDCAQLIIDIIMEDTFGAAGHEKDADAYISRTKE
VKEKMSFETAEILARNISLTYFSALIRPVKLLLKERLSSKVRTKLNQLMHRFSVGLSYND
EANTAQVLRLCYELYRQAQSYVEEKETSKKKSNRNVDDSSAHFLVQLDSRPLKTMNEYSQ
SVGTLEKFAFDILGNVLAEHQNLLTVGNLSMFLPILELSLSQSDDDEVVASNIRIMILLV
QLPFPAEKNPFFQRYTTQVLKILRECPNTGSELCQACLKYLSGVLEFKFQIELTNQDIKH
ILLQIQPDLAEPPKQELAFEFLKSLVSQHVMLPEIYDIMNEVAEIMITNHNKLTRKLSLE
VYLQFLMEYDQSRGRLERQFMMLVDNLDYPVETGRQSVMELLHHVVQSSDIGLISKLSSS
FFVSLINVSIVDDSSKCREMASLLISQILKILYEHSSSEILLKIIKYGKAWTNHETTILQ
RCGLHTYKLLIQQTGVGYNSEFDALILQTCHKVFASASAASTAIIEWELLFYCLNTFACI
LEHRGELELNDARLLTIWKDLIGILLFPHSWIRLLASRIIGSLIEHTAVFMTVFDQYDAQ
TIAYRLLHQLDAPQVSEKLSEQVVRNLSSLSVHWNSSNAKCLQKDEMDCQYNTSLEWALS
RVCAIVRQDSRASQAKKAGIQYFAVIIQLVNPDKLRQLYAKQIILALYPFIEREYHDGGK
MELEQLAEECVSMLNSKLGTSVFTELFVEVQTIVHQRRAERKAHWKDIQDTKPEEAQKLR
AIRHEKKRKRTKENLLTQPCRMSFTAMTSEPVKNSR
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagaaaaataccaatgaatcgtctaggagatatcagttcaggtcctttagg
gatcatatagaatctataaagatagaacccaccctaaagctttcgaagaggtcctttgat
tatgctgatgtttcccatttcctatctgccctgaatcactggagagaattgaatgcaact
agctcctttatcgatctcgttgacgaggttacaccaattagtcagactcttccgcagtta
ttatatcataaagacgcaattttcaatgctttagaaagatctcttcaaaccaaccaggcg
ttaggattacggccagttcttgagatgactgctcaactatgtcacgacctaagcgaagac
ttcctagagtattatgagagaataatgaaagttcttagagatttgtctgtaaaacaaact
gatgcagcttgcttagagtggattttcgactgtattgcatttattttcaagtatctagtc
aaatacctctcgcagaatttgattccaacgttcaggtatttgacgcctttgttggagaat
gacacaaaaagatacaacgtcgtattttcttctcaggctttgtcttttttgattaaaaaa
gctgcccccaatgctttaaaggacttgataaagttttcgtttgaggagccgaaaaagatg
aagactttccacaaaacttattttgaggctttggtaattatgtactctgagtccatgaaa
ggagtttcaggttccttgcacagcaaatctgaccagattcttgccgctctagtttcttat
gttgtcactgaacctgaacacgacatggccactactgtgttatgtgatacgttatccaat
gttttacgtcatacaaacactagagagcaagcgagaggactgaatgaacttatattggtt
caattgaatgaggtactagataagaacgagccccttgaatcatatgtctattgttctttc
gtgaggatattaaccgttttggtatatacggacaacggctctaagataagtaactggaca
aaaatcctccagactgcagaaagagtaatagaattttcttcaaacaatgaagagaagagg
ttttgtcaactctctttgaatttatatgcggttttactgaggaactgcgagatgtcagat
atggctaaatattaccgccagttattcagcagagccctttccttcaaatgcagtttattt
ctccctttcattgagctgtgtttgagtttaaatgttcagaagactgtagctttgtcgaac
gcatacctgcagcagttcatgacagaaaactggcgaacctcaaccaaagagataacatac
tttattcataagatctctgagatgaatttactctctatggcagcagacaatcatgggttc
ctgaatagtcgtttttccattactttttctcccgagttgcctcatcatctagttgctcaa
ctatgtttagatgacgagtctgacgaggcgatctacgagaatctctggagactcaggtta
ctgaatttaacaggttcaaaaattgatcccaaacttgtccacattgtaaggaaggttttt
gatgcaagttttagatccaattcaactttgtctaaagagataattgggctcactttaaag
acattatcgagagtagaccttgattcagaaactatgggtcatgttgtgaagaaattactc
ggatgtgcagattctcataaaactaacgtccactatctagaaggtgctaccgaatttttg
agtggcttaagaaatgaggtacctttggaaatgttgaatgataaccagttatctctcatt
cagtccttttgcaccaactgctcactgccttatcacgaggttcgtaagagtactttaaag
ttgatcatagttattcttctcaaaataaatgacactgaacagacagtgtcattattgcgc
aaatgcttgttgatagaagatattcccctctcttttgagtctagtcgagacatccagttg
agactcaggaatttagcctcagattattcttcatcaccccctaattacctaagtgatatt
gtcgtgctgagattcttttttggccaactggcaaacaaattttcgccctcctggaaagtt
atttgggaagtattccccaaaatagctgcaaaaaattgcaagtatgtctgggaacttgcc
tattactttttgaaagatcctcaaaatcatactgctgaagtagaggcggatgatagtttt
gattttttagggcgacaagaggaagcttttagccatcacagtacaaatccttggtcgacc
atttccgatacaagatttgccaaattttcaaatgcttcagctcaattcttttcatcttac
gaaaacatttcattttcattactcaatactctggtctatactccggatgatttcaatggt
atcttttcaatgagaagtcaagttttaaaaactttgattacttttccaagtcttcctcaa
gaacacagtatagatcttgtgccttttcttcttaacaagtttgaagaagattgtgaatta
aaaatgggaaagtaccaggtattctctgccgctgataaggcgttgcttttagatcttttt
acagagtttccggaattgaaaagcattgagtacagtgatcggatctatcattatgctctc
aacttattgaccagtagagacgacagacgccaaagattggctctgaaatgtatatttgca
ttcaaaaacaaacacattgaaaagtacagggataatttggaaaacttgattgatgacact
tcattcaaagatgagattttcaggttagtgagcaagaatcaagacagtaacctgcttgaa
gaagaagatattgattatgttatacccctggtattaagaattttgtatggtaaacttcaa
acagctaaagggagtgactcgaaagaaggaaaaaaaaatgctgttctctctattttgccc
aatctgcaaaaacgtcacattatatattttctttcgttgggacatgaaaacattgatagt
gaatcgtttttccgtgaccaaaaagtcaacacccataccgtttcagagaaatctttgaaa
caacaagttggatttgttaacatgttgcaagcagtagcgtctactttgggagaaccttat
acggaagcgttgggttactcagttaaacctctagtctattctttatcattggcacagact
cttgtccagactaagaaagatgatgttaaagatgaatccgaagttcaaatagaaaagttg
gcgaagaccctgagacagtcggccatgaactgtttgagaaaattttttcttgttcttgac
cctcaagttttctcatgggatgagtattttccactaatattcaaatttattttgaaggag
cggttgcttaaaattttaccggaaaattcaagacaagcatcttctattttaaagatttta
tgcttgtggtcaggagataattattatcattacttatttaccgaagactttcttcctctc
agagctgttctatctttattggatacagagtatttcaactgccaagttttgaagatggtg
ctcaattttgtcaaaacaatgatcagcagggttgtcccagatgacgtttacattgaagct
atctctctgattgtggaagctgttttgaaggtattggctccactcttagaaaagatagaa
gagcctccaatactaactcttgggatcgatgtacttttgatcctggtagagaatgattac
gtcaatgaccttcaaatcaaaactcagttgatagaagctgttactgcagtacttaataag
caaaaactacaaatagatcagcttgacagaattcgagtttatcagactttggcttctttg
gtggctaatattgcttcaactatcgaggaaattaatcctttatatcaagtcatttccaag
gcctatgaaatcgaaactcaaaacgacattagactgatgattgggagtgtttttatgaaa
cttcaaggagagtatgaagagctttatccggttggtgatttggtaaactctttgaatgca
catggacctaattcagataaggacattgattacccaacgaggctaagagccttcagaaga
ataaacgaagacttgtttctgagtttgacacaactgcagtggctcccaatcctttacaat
tctctttatttcatcgatcatgccgaagagttatcgttgagatcaaattcctcctttacc
ctgagaagatttattgagtgttactcgttgaaggaaaccatcgaagctgcccaacctcta
atacagattctaaaggctgtagtgctaccgcatttgaaagaaggacttttgaatgaaaat
atactagttcgaactgaatatattggagtgttgagaagcatcgttagtgtatcgcatcac
tttgatgagttgaatgatttgaaggtactgatcgcccaaactgaagagagctcggtgttc
aactctgtgcaatttgcggagctacacgaaagtgacgaggacaaagttgactttttcagt
gacattgttaacattcaaacgtattgtcgtttttcggccctggaaaagcttagaaaacat
cgtcaagatttgtatgttgataacctttatgaatatatccttccagtcattgaaacagta
tgtttttccaaggatgagaagcacgagcaattggccattgaggcaattgatactatggga
tatctgtcagttgtgctaaaatggagtcagtttaaactactaataagaaagcatcttgct
cgcttgaagcgggaagttacagttgatggtttaagaaacaatataaatatagttgttgct
ctttccaagagcatgtttcaatctgttgaaaactataaaaaaggtgacaatttactgacc
ttcaaagaataccctacagatgcagaattagaattctttgtcaagaggaccttacttccc
tccatgataagtcgtctaggtgtttcttctatacaagaagatgaggaacagaacacggca
tctatccgggttcctttgtcacttggaatggtttcggcagtgatgtgtttggatgagcaa
tcaatgattgctgaacttcctggagttttgacagggatttgtcaacaactgcggtgcaag
atcgagtcggtccgtgatgctgttagagaatatcttggccgtattgctgtgcttctaggc
gcgtcacactttaagtttattattaaggaacttaagggtgcgttgtcccgaggagctcat
gttcatatccttagttacacgttatatcatctgatggtccatatgaccaagaatgatcat
ctcgcccatggtgatatggatgattgtgcccaactgatcattgatattattatggaagac
acatttggagctgctggtcatgagaaagatgcagatgcttatatcagtaggacgaaggag
gtaaaggaaaagatgagtttcgaaacggccgaaatcctagccagaaacatctctttgaca
tacttttctgctcttattcggccagtaaaacttcttctcaaagaacgactttcctcgaag
gtgcgtactaaactcaaccagttaatgcatagattttcggtaggtttatcttacaatgat
gaggcaaatacagcacaagttctaagactatgttatgaattatatcgtcaagcccagagc
tacgttgaagagaaagagactagtaagaagaagtcaaatcgaaatgttgatgactcgtct
gcccattttttggtacaattagacagcaggcccttgaaaacaatgaatgaatactcacag
agcgtgggcacacttgagaaattcgcattcgatattcttggaaatgttttagcagaacat
cagaatctgttgacagtgggtaacttatccatgtttttgcccattctggagctatcgctt
tcacaaagtgatgatgatgaagttgttgcttccaacataagaattatgatccttctggtt
cagttgccatttcctgctgagaagaacccattttttcagcgttataccacccaagtgcta
aaaatcctacgagagtgccctaatacaggttcagagctttgccaagcttgcctaaaatat
ctctctggagtattagagtttaagttccagattgagttaacaaaccaagacattaaacat
atattattacaaattcaacctgatttagccgaacctcccaaacaggaactcgcttttgaa
tttctcaagtcattggtctctcagcacgtaatgcttccagagatatatgacattatgaat
gaagtagctgagatcatgataacaaaccataacaaactgaccaggaagttgtcgctcgaa
gtttatcttcaatttttgatggagtacgaccaaagtcgaggacgattggaaaggcaattt
atgatgctagttgataatttggattatcctgttgaaacaggtcgtcagtcggtgatggag
ctattgcaccacgttgttcagtcttcggatatcggtctgataagcaaattgtcttcgtca
ttttttgtatctttgatcaatgtatcaattgtggacgattcttcaaaatgcagggaaatg
gctagcctattgattagtcaaattttgaaaattctctatgagcattcatcttcagaaata
ttgttgaaaattattaaatatgggaaagcttggacgaatcatgaaaccacgatattgcaa
cgttgtggtcttcacacctacaaactgttaattcagcaaactggcgtgggctataattca
gaatttgatgccttaatattacaaacttgtcacaaagtctttgcctctgctagtgctgcg
tcaactgcaatcattgaatgggagctactgttttattgtttgaatacttttgcctgtata
cttgaacatcgtggggaacttgagttgaatgatgcccgactgttaactatttggaaagat
ttgattggcatccttctatttcctcatagttggatacgactcttagcatcgcgcatcatc
ggttcccttatagagcacaccgctgtgttcatgactgtttttgaccaatacgatgcccaa
actatagcttataggctactgcatcagctagatgctccacaagtgtcggagaaattgagt
gagcaagttgtcagaaatctgagtagcttatcagtgcattggaattcatctaacgccaag
tgtttgcaaaaagatgaaatggattgccaatataacactagcttggagtgggccctctct
cgagtatgcgctatagtaaggcaggatagtagagcgtcgcaagcgaagaaagctggaatt
caatactttgcagtcatcattcaattagtcaatcctgataaattacgtcaactatatgcc
aaacaaatcattctggctttgtacccattcattgaacgcgagtatcacgatggaggaaaa
atggaattagaacagcttgcagaagagtgtgtatctatgttaaattcaaagctaggaact
agtgtttttactgaattatttgtcgaagttcagactattgtccaccaaagaagggccgaa
agaaaagcccattggaaagatattcaagacactaaacccgaggaggcacagaagctgaga
gctatcagacatgaaaagaaaaggaaaaggaccaaagaaaatttgttgacgcaaccttgt
cgaatgagttttaccgcgatgacaagcgaacccgtaaaaaatagtagatag
DBGET
integrated database retrieval system
