Komagataella phaffii: PAS_chr1-1_0483
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Entry
PAS_chr1-1_0483 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K15163
mediator of RNA polymerase II transcription subunit 12, fungi type
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-1_0483
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
PAS_chr1-1_0483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12
Str_synth
PTHB1_pf
Motif
Other DBs
NCBI-GeneID:
8196705
NCBI-ProteinID:
XP_002489850
UniProt:
C4QWE6
LinkDB
All DBs
Position
1:complement(945238..949854)
Genome browser
AA seq
1538 aa
AA seq
DB search
METNRASEHSIQVPPGVYPLNGHDSVNEGPKTELIYPDFKIWQHSPQDDIIMTRYLQKGF
FEAPVVQNESLSARSLMAVSLHENSNEPNASEEQTAKAPNPKIKLLSDYIIQAIFQRRQL
SKIHTKVIVRPPPRVTLTEHKREKWMENLANTRIPLSQLARAIPHGIKNRILLEQCCLYN
VPVARAVWLVKCVAGNEVRVLRRKVQQSSTNALSTNAIFNTWLSDWTDQVTNFLERFMIS
IFTPNQKDWRERSNYNLTLVGNLFMEDLLRQDKFLGWIVSFLRQCLVKLSSGSKEEPDHV
SQGLNLLTIHLVILRLFWFKILKSDHISKEASVVLLQLHAKLVDKSTLQSGNSPSTFIIE
LKENINFLIKYLFYYSPDAFIIPNYWHDLKHTLKKILDTSNNLVRTQFKLVTYRNESLIV
NLPQSLNKPLNLNQDEPLQSNRDDLLKSLDTFFSSSDSIGTLTSLVFEKIDEDEETEIKT
FAPDIEPNEPEASETIEIDSPIKNSPIPNNKEVSPPITTKKGNKKDTRKLWSYNFRLLLN
WSISNYRNQSSSVVQVNLVVSILEQRLREIYSNTTNLRAKKLKLEIELELLDWIFQINDS
YNVLKQNNETEIVYKLETLEYLCARCYQSGLLTVSSYIRKLIASGVIYLPDCFKNSTIHS
LVLKSLPVLKNNNLDNILRKLSNKEEPYDSAKDILFFEEAKSSLLPFIEWIVSDFEINLD
PVWNCLKSLDTKTAILVSEWFMSETFRLLFERTANKNQVKVTEKKLSLITYALVEKLNCL
PQFYVKLLQAFALELKSFSIDKMTMIFISEIIQFHEQQAAVFSAKEETNAYTNMIKSLFQ
VVDEGKYLINWTVFKPTLVNDKNVISELSKRIELSKKSYIKDLSNLYQLNLRSSSFLLHN
MNSKVENLLNFNGLVHNTHTLAGRLWDMVRKKSFTNTDIPPDQYERDLFQSLKLMKLERP
NDLVKAVLAYTKKNVLATLSLEYTSITTYILKLFLNEVLDLEQLWDLFSTVNDTFTDVSC
QKFLKGLMFDKYFSDIECIQLLSDFELLKLKMVRSKVKQTDFKSWCSRMRQCLLEIDSPE
TNNGRTNSTPVSTELDQLPTSTTNNLPTPMQLMSTPTTVSNFDSMLSTTPFNSFLSRFKD
EVMETCKEMINVHTELSIKFFNGLTSSLQGEGMSIRILNQLLLQNDQVIVSCNDMSKVLQ
LLDPLNLGVCQLLTKTLHEKAFQYKRKKNSMNHEEKSSLMADLTLCFLKDLMKMPKYQHS
DHKSLELVGELFRFLEPDLKLLLLHSCELFFLTSEMFPLVNSREDNPGDNTLDILYLIIN
SCTRYEDLFSLSSKYQNGIPIPDNLVFSLTVSLEKMIGKCARPKRKLDKHAEQKAIESSI
LLVCRIILIHKGYLVGLILKRSTGNINKDSFLQNLVKLFNSKFIKSSSKLENLLYDIIVS
IKILIGEHIGSTNHEILNVSPPDYSNKLNYLLENVSFQDGLRMSNDSQELFVQNTKTKTL
SKFYIRPYELLPETTTKMEESCINLHLFNASTELKNPK
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaacagggctagtgaacactccattcaagttcctcctggagtttacccgctc
aacgggcatgactctgtgaacgaaggtcccaaaacagagcttatctacccagatttcaag
atttggcagcattctccacaagatgacattataatgactagatatcttcaaaagggtttt
tttgaagcgcctgtggtccaaaatgagtccttatctgctcgaagtctgatggccgtgagt
ctccatgaaaactccaacgagcccaatgcatccgaagagcagacagccaaggctccgaat
ccaaagataaagcttttaagtgattacattatacaagcaattttccaaagacgacagttg
agtaagatacacaccaaagtgatagtcagacctcctccaagggtaactctgaccgaacac
aagagagaaaaatggatggaaaatttggccaataccagaatccctttgtcccaattagct
agagctatcccccatggtatcaagaaccgaatactgctggagcagtgctgtctgtataat
gttcctgttgcccgtgctgtctggttggtcaaatgcgtggcaggtaacgaagtcagagtg
ttgagaaggaaggtccagcagtccagcaccaatgctctttccaccaacgcaattttcaat
acctggctttctgattggaccgaccaggttaccaactttttagagcggttcatgattagc
atatttactccaaatcaaaaagattggagggaaaggtccaactacaaccttactttggta
ggaaatctcttcatggaagatcttttgagacaagacaagttcttgggttggattgtgtct
tttttgcgccaatgcttggttaagttatcctctggttcgaaagaagagccagatcatgta
tcgcagggattaaacttgcttaccattcatttggtaattctacgtctgttctggttcaaa
atcctaaaatcagatcacatatcaaaggaagcaagtgtggtccttttacaattgcatgcc
aaattagtggacaaaagtacactccagtcgggaaactccccgtcaacatttatcatcgag
ctcaaggagaacattaattttttgatcaagtatcttttctattacagtcctgatgctttc
atcattcccaactattggcatgatttgaaacacacattgaagaaaattttggacacttct
aacaacctggttcgaacgcagttcaagcttgtaacctacaggaatgaatccctaattgtc
aatctgccgcaatctttaaacaaacccttgaacttgaaccaagatgagcctttgcagagc
aacagggatgatctcctcaaatcactggatacgtttttttcctcctctgattctattggc
acgttgacgtcgttggtttttgaaaagatagacgaagatgaagaaacagagatcaaaact
tttgctccagacatagaacccaatgaaccagaggcctctgagacaatagagatagattcg
cctattaagaattctcccattcctaataataaagaagtttcacccccaatcacaaccaag
aaaggaaacaagaaggataccagaaagttatggagttacaatttcagactgttgctaaat
tggtctatatcaaattaccgaaaccaaagctcgtctgttgttcaggtgaatcttgttgtt
tctattttagaacagaggctacgagaaatttattcaaacacaaccaatcttagagccaaa
aagttgaaactggaaattgagcttgagctattggactggatattccagattaacgattct
tacaatgttttgaagcagaataacgagacagaaattgtatataaactagagacattggaa
tatctttgtgcaagatgttaccaatctggattgttgactgtttcatcttacataagaaaa
cttatcgcttccggagttatctatcttccagattgcttcaaaaatagcacaatccacagc
ttagttctgaaaagcttacctgttttgaagaataataatttggacaatattctaagaaag
ctctcaaacaaagaggaaccgtatgatagtgccaaagacatcttattcttcgaagaagca
aaatcaagtttgctcccgtttatcgaatggattgtcagtgattttgagattaaccttgat
cctgtctggaactgtttaaagtctctggatactaaaacggctatattagtctctgaatgg
tttatgagtgagacttttcgtcttctcttcgaacgaactgcaaacaagaaccaagtaaag
gttacagagaagaaactaagtttaataacctacgcattggtcgaaaaattaaattgttta
cctcagttctacgtgaagctcctgcaggcatttgctcttgagttgaagtcgttttcaata
gataaaatgacaatgatatttatctccgagattatccagtttcacgagcaacaggcggct
gttttttccgccaaggaagagactaatgcctatacgaatatgatcaagtctttgtttcag
gtcgtcgatgagggtaagtatctgatcaactggacagtattcaaaccaacactggtcaat
gataaaaatgttatatcagagctttctaagaggattgaactatccaaaaagagttacatc
aaggacttatccaacctctatcaacttaacttacgttcatcttcattcttactccataac
atgaattccaaagttgagaatttgttgaatttcaacggccttgtacacaacacacacaca
ttagcgggtcgactatgggatatggtcaggaagaaatctttcactaacacagatatacca
cccgaccagtatgaaagagacctcttccagtcgctgaagctaatgaaattggaaaggccg
aatgatttggtcaaagcagttctagcgtatacgaagaaaaacgttttggccacattgtcc
ttggagtacacatcgataactacttatattttgaaactctttttgaatgaagttctagat
ttggaacaactttgggacttattcagcaccgttaacgatactttcactgacgtcagctgc
cagaagtttttgaaaggactcatgtttgataagtacttctcagacattgagtgtatccaa
ttgctctcagattttgaacttttgaaattaaagatggttcgttctaaggtgaagcaaacg
gatttcaagtcatggtgttcaaggatgaggcaatgcttactagaaattgactcaccggaa
acaaacaacgggagaacaaattctacccccgtttcaaccgaactggaccaactgcccacc
tcaaccacaaataatttgcctactccaatgcagttaatgagcactccaactacagtaagc
aatttcgatagcatgctctccacgacacctttcaacagcttcttgagtagattcaaagac
gaggtcatggagacgtgcaaggagatgatcaatgttcatacggagctttctataaagttt
tttaacggactaacctcttccttgcaaggggagggtatgagcataagaattctcaatcaa
cttctgctgcaaaacgatcaagtgatcgtgagttgtaatgatatgtccaaagtactgcaa
ttgctagacccattgaatttgggggtttgccaactattgaccaagaccttacatgaaaag
gcttttcagtacaaaagaaaaaagaactctatgaaccacgaagaaaagtccagtttaatg
gctgatttaacgctatgtttcctgaaagacctcatgaaaatgccgaagtaccaacattct
gaccacaaaagtttggagttggtgggagaattgtttagattcctggaacctgatttgaaa
ttgctgctgctgcattcatgcgagctgttttttcttacatccgagatgttcccgttggta
aactccagggaagataatccgggagacaacacactggacatcctttaccttatcatcaac
agctgtactagatatgaagacttattttcattatcgtccaagtaccagaacggaattcca
attccggacaatcttgttttttcgttgactgtgtcactggagaaaatgatcgggaaatgc
gcccggcccaaaagaaagcttgataagcacgccgaacaaaaagcaatcgagtcatccatt
ctcttggtgtgccggatcattctgattcacaagggttacctggtcggattaatactcaaa
aggtctacaggtaacatcaataaagactcatttttgcagaatttggtgaaacttttcaat
tcgaagttcatcaaatccagctctaaactcgagaatttactgtatgacataatcgtttct
atcaagattttgattggtgagcacataggctccaccaatcatgagatactgaatgtttca
cctccggattacagcaataaacttaattaccttttggagaatgtttccttccaggacggc
ttgcgtatgagcaatgacagccaagaactattcgttcaaaacacgaagaccaaaaccttg
agcaagttctacattcgcccttatgagttgctgcccgagactactacgaagatggaggag
agctgtatcaacctgcacctgttcaatgcatccacagaactgaaaaatcctaaatga
DBGET
integrated database retrieval system