Komagataella phaffii: PAS_chr1-3_0025
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Entry
PAS_chr1-3_0025 CDS
T01092
Name
(RefSeq) strand exchange protein
KO
K10958
DNA repair protein RAD57
Organism
ppa
Komagataella phaffii
Pathway
ppa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAS_chr1-3_0025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr1-3_0025
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
PAS_chr1-3_0025
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
DnaB_C
Motif
Other DBs
NCBI-GeneID:
8197958
NCBI-ProteinID:
XP_002489361
UniProt:
C4QV07
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Position
1:47056..48600
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AA seq
514 aa
AA seq
DB search
MDLYEQCPSSELLLNERFEPLLTVLTKAWILTSDIVISSPQDIHKRVSNLTGGKLTISLN
ELIVFRSLLMKELNSQIESNLVNLNTSMLQEQTLKLNDLSFTTGDELLDYYLRGEYDDNV
VLPLGYLIEVTGGSSCGKSHFLMQFCLTVQLPIQLGGLGADLEAPESERTNECKAVYVST
EGYMETRRLSEMCDYYGNIMTTNGIADSDLYPSTSNVLQIQCSDLETQDHIIFVQLPALL
EKESGKVKLICIDSISHHVRVEFENRSYQESMARNTYLYDLSRHLKRLAKQYEVCIVFSN
QVSDKPITKLISNDRLALDYQLGWMSGWSNETILYRQNYQDDDGDADASFTSSSRKRDFS
SMTEEDFADEEDDGTKEDTDTDERNFTLQDELSFTEQIKLDKHEYLFGNEVTKLKETKIP
ALGYLWNTLIDVRIVLFKNSRPIIDENLIDSMAFDLGLSDFKNIDQLKENRMMNEGNWAT
ERWCRLCFSPFNGYSSDKVQRFEIWKGGIRGVVN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtatgagcaatgtccgagctcagaacttttgttgaacgaacgatttgagcct
ttgctgacggtgctgactaaggcgtggatacttacttctgatatagtcatttcctcccca
caagacatacacaaacgtgtctccaatttgacagggggaaaactgactatatcgctgaat
gaactgatagtatttagaagtctcttgatgaaggaattgaactcgcaaattgagtccaac
ttggtgaacttgaacacatcaatgctccaagagcaaacactgaagctgaatgatttatct
tttaccacgggagatgaattattggattactatctacggggagagtatgacgataacgtc
gttttgcccttgggttatctgatagaagtgacaggaggcagttcatgcggcaaatctcat
ttcctgatgcaattttgtcttacagtgcagttaccgattcaacttggaggcttaggggcc
gacctagaggcgccagagtctgaacgaactaacgagtgcaaagctgtttatgtttccaca
gaggggtatatggaaactagacggttaagtgaaatgtgtgactattatggaaatatcatg
acaaccaatggaattgctgattcggatctgtatccgtcaacctcaaatgtcttgcaaatt
cagtgttcagatttagaaacgcaagaccacattatttttgtacagcttccagctttacta
gagaaagaatcaggaaaggtgaaactgatctgcatagatagcatttcgcatcatgtaaga
gtggaattcgaaaaccgatcataccaagagtcaatggctcggaatacttatctttacgac
ttgagcagacatttgaaacggctggcaaaacagtatgaggtttgcattgtttttagcaac
caagtcagtgacaagcctattactaaactcattagtaatgatcgacttgccctagattat
caactgggctggatgagcggctggtccaacgaaactatcctgtatagacaaaactatcag
gatgatgatggagacgcagacgcttcgttcacgtcaagtagcagaaaaagagatttctca
agtatgactgaagaggactttgcagatgaggaagatgacggcaccaaagaggatacggac
actgacgagagaaatttcactcttcaagatgaattatcattcacagaacagatcaaacta
gacaagcatgagtatctatttgggaatgaagttactaaattaaaagagaccaaaattcct
gctcttgggtatttatggaatacattaattgatgtgcgcattgtgttgttcaaaaacagc
agaccgataattgatgaaaatttaatcgatagcatggcttttgatttaggattatcagac
tttaaaaacatcgatcagctaaaagaaaaccgaatgatgaatgaagggaattgggcaaca
gagagatggtgcagactttgtttcagtccattcaacgggtattcaagtgataaggtccaa
agatttgagatctggaaaggtggtataaggggggtggttaactaa
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