Komagataella phaffii: PAS_chr1-3_0104
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Entry
PAS_chr1-3_0104 CDS
T01092
Name
(RefSeq) Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00020
Citrate cycle (TCA cycle)
ppa00630
Glyoxylate and dicarboxylate metabolism
ppa01100
Metabolic pathways
ppa01110
Biosynthesis of secondary metabolites
ppa01200
Carbon metabolism
ppa01210
2-Oxocarboxylic acid metabolism
ppa01230
Biosynthesis of amino acids
Module
ppa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppa_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ppa_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PAS_chr1-3_0104
00630 Glyoxylate and dicarboxylate metabolism
PAS_chr1-3_0104
Enzymes [BR:
ppa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
PAS_chr1-3_0104
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
8197413
NCBI-ProteinID:
XP_002489444
UniProt:
C4QV90
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Position
1:198799..201141
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AA seq
780 aa
AA seq
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MLSARRVLAKINSRGLATVSGLTKDSLVEMNLLEKGNYINYKQQLDNVNIVKERLGRPLT
YAEKLLYGHLDKPHEQDIERGVSYLKLRPDRIACQDATAQMAILQFMSAGMPSVATPTTV
HCDHLIQAQKGGAADLERAIRLNKEVYDFLATACAKYNIGFWKPGSGIIHQIVLENYAFP
GELLIGTDSHTPNAGGLGQLAIGVGGADAVDVMAGLPWELKAPKIIGVKLTGRMNGWTSP
KDIILKLAGITTVKGGTGAIVEYFGDGVDTFSCTGMATICNMGAEIGATTSVFPFNNSMV
DFLDATGRSEIGEFAKVFQKEYLSADPGCEYDQVIEIDLNTLEPHINGPFTPDLATPVSK
MKEVAVANDWPLEVKVGLIGSCTNSSYEDMTRAASIIEDAASHGVKAKSLYTVTPGSEQI
RATIARDGQLKTFTDFGGSVLANACGPCIGQWDRQDIKKGDKNTIVSSFNRNFTSRNDGN
PATHAFVASPEMVTAYAIAGDLRFNPLTDKLKDKDGNEFLLKDPVGVGLPVRGYDPGENT
YQAPPEDRASVEVVISPSSDRLQRLTPFQPWDGKDAERLPILIKSVGKTTTDHISMAGPW
LKYRGHLQNISNNYMIGAINAENGEANNVKNHYTGVYSGVPDTAAAYRDNGVKWVVIGGE
NFGEGSSREHAALEPRYLGGFAIITKSFARIHETNLKKQGLLPLNFTDPAAYDRIQPDDE
VDILGLTELAPGKNVTLRVHPADGSPTWETPLSHTYNAEQIEWFKYGSALNNMAAVKASK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgttatccgccagaagagtacttgctaagataaacagccgtggattggccacggtgtca
gggctcaccaaggattctctcgttgagatgaacctgttggaaaagggcaactacattaat
tacaagcaacaacttgacaacgtcaatattgtcaaggaaagactgggaagacctttgacc
tacgctgaaaagctgttgtacggtcacttggacaagcctcatgaacaagacattgagaga
ggtgtctcttacttgaaattgagaccagacagaatcgcttgtcaggatgctaccgctcag
atggccattttgcaattcatgtccgctggtatgccttctgtcgctactccaactactgtg
cactgtgatcacttgattcaggctcaaaagggtggtgctgccgatttggagcgtgccatc
agactgaacaaggaagtctacgatttcttggcaaccgcttgtgccaaatacaacattggt
ttctggaagccaggttcaggtattattcatcaaattgttctggaaaactatgctttccca
ggtgaattgctgatcggtaccgattcccacactcctaacgctggtggtttgggtcaattg
gccatcggtgttggtggtgctgatgccgtcgatgttatggctggtttgccatgggaattg
aaggccccaaagattatcggtgttaagctgaccggtagaatgaatggatggacttctcca
aaggatatcattctgaagttggctggtatcactaccgtcaagggtggtactggtgctatc
gtcgagtacttcggtgatggtgttgacaccttctcttgtactggtatggctaccatctgt
aatatgggtgctgaaattggtgccactacttctgtgttcccattcaacaactccatggtt
gacttcttggacgctactggaagatctgagattggtgagtttgccaaggtcttccaaaag
gagtacttgtctgccgaccctggttgtgagtacgaccaggttatcgagatagacctgaac
accttagagccacacattaacggtcctttcaccccagatttggccactcctgtctccaag
atgaaggaggttgccgttgccaatgactggcctctcgaggtcaaggttggtttgatcggt
tcttgtactaactcctcttatgaggacatgaccagagccgcttctatcattgaagatgct
gcctcccatggtgtcaaggctaagtctttgtacactgtcactccaggttccgaacaaatt
cgtgctaccattgccagggatggtcaactgaagactttcactgacttcggtggatccgtt
ttggctaacgcttgtggtccatgtattggacaatgggatcgtcaagatatcaagaagggt
gacaagaacactattgtctcttctttcaacagaaacttcacttctagaaatgacggtaac
ccagctactcacgcttttgttgcttccccagagatggtcaccgcttatgctattgcaggt
gatttgagattcaacccattgactgacaagcttaaggacaaggacggaaacgaattcttg
cttaaggaccctgtgggagtcggtcttcctgtccgtggttacgaccctggtgaaaacact
taccaggctcctcctgaagacagagcctccgttgaagttgtcatttctccaagctcagac
cgtctgcaaagactgactccattccagccatgggatggaaaggacgctgagagattgcca
attctgattaagtccgttggtaagaccaccaccgatcatatttctatggctggtccttgg
ttgaagtaccgtggtcacttgcagaacatttccaacaattacatgattggtgccataaac
gctgaaaacggtgaagccaacaacgttaagaaccactacaccggtgtctactccggtgtc
ccagacactgccgccgcgtaccgtgacaatggtgttaagtgggtcgtcattggtggtgag
aacttcggtgaaggttcctccagagaacacgcagccttggagccaagatacttgggtggt
ttcgctattatcaccaagtccttcgctcgtattcacgagaccaacttgaagaaacaaggt
ctgttgccattgaacttcactgatcctgcagcttacgacagaattcaacccgatgatgag
gttgacattttgggattgaccgagttggctccaggtaagaatgtcactttgagagttcac
cctgccgacggctccccaacttgggaaactccattgtctcacacctacaatgccgaacag
atcgaatggttcaagtacggttctgctttgaacaacatggctgccgtcaaggcctctaaa
taa
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