KEGG   Komagataella phaffii: PAS_chr1-3_0110
Entry
PAS_chr1-3_0110   CDS       T01092                                 
Name
(RefSeq) Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p)
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ppa  Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppa03009]
    PAS_chr1-3_0110
Ribosome biogenesis [BR:ppa03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    PAS_chr1-3_0110
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_THOC3 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_TEP1_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd ANAPC4_WD40 WDR55 ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 EIF3I Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_CAF1B_HIR1 WD40_Gbeta CFAP251_N Beta-prop_ACSF4 WDR54 PEP5_VPS11_N BCAS3_WD40 MRP-L28 TraA-like WD40_like YolB DUF7638
Other DBs
NCBI-GeneID: 8197419
NCBI-ProteinID: XP_002489451
UniProt: C4QV97
LinkDB
Position
1:212238..213680
AA seq 480 aa
MDESVFYTPSTATDAAELSFLASIRSNKSHVQFRQCAANAASITGTGQGHRLFVACPEKA
LIQVYLWGKESPEQKMAVPEELTSLLWVHIFGAGFLVGGGKSGRLYVWELASGYLLSAKE
AHYQEVSCLEVSHDGQVLVSGGKDSRVLIWRLADLIQFSSDPLPKPIHVLTNHSLPITSI
ALTKGISNDIKLFTSSLDGEVRHYNVSNGELLTTFIFGEPVNALAVDPAQRYLYAGLSSG
TIRLVPLFIVNHKNQLESNTGCGKLVSATSADDPESQFIITSHQDSPVTCLQVSADGGLL
VSADSAGKVFVNDIVSRQVARQLRDCSGPISTLRLLINDLERVEPSDLSTKASTPRILPN
LKRSLISDTEISKHDINIPAAGTPEGDIGSLASDNEQLKEQFDLRGFCNQVRKEHVVYQL
NTEEEAAVDQSVQQQQQDTDENVSTQQYASQLKEMTKAYNELKRVHQDLYSEHLKLLDRD
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggacgaaagtgtcttttatacaccttcaactgcaacagatgcagcggagctgtcattt
ttggcctccatcagatcaaacaaatctcatgttcagttccgtcaatgtgctgccaacgct
gcttccatcaccggtaccggtcaaggtcacaggttatttgtagcttgtcccgaaaaagca
ttgatacaagtgtacctatggggaaaggaatctcctgagcaaaagatggctgtgccagag
gagctaaccagtttattatgggtacatatatttggagcaggattcttggttggtggtgga
aaaagtggaagactgtacgtttgggagttggcttctggttacctgctaagcgcaaaagaa
gcccattatcaagaagtttcatgtttagaagtctcgcatgatggccaagtccttgttagt
ggtggtaaagattccagagttctgatatggcgtttggccgatctgatacaattctcatct
gatcctcttcccaaaccaattcacgttctaacgaaccattcattaccaatcacgtccata
gcgctaactaaaggtatctctaacgacataaaactgtttaccagttctttggacggagaa
gtaagacattataacgtctcgaatggcgaattgttgactacttttatctttggagaacca
gtaaatgcgctagctgttgatccagcgcagagatacttgtatgctggcttatcttcagga
actattagactagtacctctttttattgtcaatcacaaaaatcaacttgagagtaatacg
ggttgcggcaaattggtttctgcaacttctgcagacgatccagaatctcaattcatcatt
acctcccatcaagacagtccagttacatgcttacaagtttctgcggatggtggactctta
gtcagtgcagattcagcaggaaaggtttttgtcaatgacatagtttctcgtcaagttgct
cgtcaactaagggattgttcaggaccaatatccaccttaagactactgataaacgatctg
gaacgagtagagccttcagatctctctacaaaagcctcaactccacgcatattaccgaac
cttaagcgttctttgatcagtgacacagaaatttccaaacatgatattaatatacctgcg
gcagggacaccagaaggtgatattggtagccttgcgtctgacaacgaacaactcaaagaa
caatttgaccttcgtggtttttgtaaccaagttcgaaaagaacatgttgtctatcaacta
aataccgaagaagaggcagctgtggatcaatctgtgcagcagcagcaacaagataccgac
gaaaatgtctcaacccaacaatatgcctctcaattgaaggagatgaccaaagcttataat
gagctcaagagagtccatcaagacttgtactctgaacatttaaagctattagatagagat
taa

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