Komagataella phaffii: PAS_chr1-3_0144
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Entry
PAS_chr1-3_0144 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K22646
E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 [EC:
2.3.2.27
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr1-3_0144
Enzymes [BR:
ppa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PAS_chr1-3_0144
Ubiquitin system [BR:
ppa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SLX5-SLX8 complex
PAS_chr1-3_0144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_11
Prok-RING_4
zf-ANAPC11
TRAF3_RING
Sina_RING
Usp
SLX1_C
FYVE
DUF7567
Motif
Other DBs
NCBI-GeneID:
8196829
NCBI-ProteinID:
XP_002489485
UniProt:
C4QVD1
LinkDB
All DBs
Position
1:267473..268054
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AA seq
193 aa
AA seq
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MNAQEDSLFTPVEDSDQEFITPIDGSSSPLSDVVDTGSEQEENQQIVINDDEQRDRTNKR
KHSVLEVPDGSDTEVSSGDEIEEEEEEEEEDVIVLGSDGEKDPAANKSTIELLEASAKRK
DNQKLFKMTECPICFDAINEAVVTPCGHIFCANCIYRAMASSKPNNAQSQQGHCSLCRKV
MSWNGLVHLKMRR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacaggaagattcactttttactccggttgaggattctgaccaggagttcatt
acaccaattgatggcagcagtagccctctaagcgatgttgtggatactggatctgaacaa
gaggagaatcagcagatcgtgattaatgacgatgagcaaagagatcgcaccaataagaga
aagcattctgttttggaagtacccgacgggtcagatactgaggtgtctagtggagacgag
atagaggaggaggaggaggaagaggaggaagatgttattgtgctgggatccgatggcgaa
aaagatccagctgctaacaaatcgactatagaactgttagaggcgtctgcaaagagaaag
gataatcaaaagctgttcaagatgacagaatgtcctatttgttttgacgccatcaacgaa
gcggtagtcacgccatgtggtcatatattttgtgccaattgtatctatagagccatggca
agctctaaacctaataatgctcagtcccagcaggggcattgtagtttgtgtcgcaaagtg
atgtcatggaatggactggtgcatttgaagatgcgcagatag
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