KEGG   Komagataella phaffii: PAS_chr1-3_0182
Entry
PAS_chr1-3_0182   CDS       T01092                                 
Name
(RefSeq) Essential splicing factor
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ppa  Komagataella phaffii
Pathway
ppa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PAS_chr1-3_0182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppa03041]
    PAS_chr1-3_0182
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr1-3_0182
Spliceosome [BR:ppa03041]
 Complex B
  Other components
   Prp19 complex
    PAS_chr1-3_0182
 Complex C
   Prp19-CDC5 complex
    PAS_chr1-3_0182
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    PAS_chr1-3_0182
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 Myb_Cef Rap1_C
Other DBs
NCBI-GeneID: 8197649
NCBI-ProteinID: XP_002489526
UniProt: C4QVH2
LinkDB
Position
1:341956..343878
AA seq 640 aa
MAPVYVKGGAWTNVEDEILKAAVAKYGLTQWARVSSLLAKKTAKQCKARWEEWLNPRVNH
LEWSRDEDAKLLRLARLMPNQWRSISNITGRTATQCVERYQKLLEEAGGVSSDLRHMELG
LSGPGIESNAPVGAEFKLGDINLNPENKPAMLDTVDMDEEELEMLSEARARLANTQGKKA
KRKVREKFLEESRYIAELQKRRELKQAGIGGTKKRKKQDNQVDYLSDVPFERAPYQGTYD
VDDENLANLKEMEDYQLRANKYGIQDQDAQKQKRKRKREKEDEKKKDQMAQIVVFEELYP
TKKKKLDLPEPGSVVGDEITDDAIIQATQQLIRRSQKQSFIGSTADELESESTNGKLDNV
RPAPVSAKKERKRLVALIRTKFSQLPKPKNNFQITLPHESQAFVTGNENEIRDQYIDLGE
AERRIKLHEEEEYFKSLSRRSQTIQRGLPLPSPTAIPSTNNLLQDLVDQEIMKMIESDYN
QVNDVPGFRITQLTEEEKQQADLEIFEEITKNQDSFLKFQDHLRNLDLFKSFEYTKSFRN
LRSQYLKTRIDDISKLESTINLQNEDIIDKHNQLIQSLEELQTLSIKLDMEYNVFGHFRE
NERMVIQVRTEALQDEADEAKKIQRKAELRYNNLLENLNH
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggctcctgtgtacgtgaaaggaggagcttggaccaatgttgaggacgagattttgaaa
gctgctgtggctaagtatgggttgacgcagtgggctcgagtcagttctttacttgctaag
aagacagcgaaacagtgcaaagctagatgggaagaatggttgaacccgagagtaaaccat
cttgaatggtctcgggatgaagatgcaaaattgttgagactggccagacttatgccaaac
caatggaggtccatttctaatattactgggagaacggcgactcaatgcgtcgagcgatat
cagaaacttttggaagaagctggaggagtaagtagtgatctaagacacatggagctagga
ctttcaggcccaggtattgagtcgaatgcaccagtaggtgctgagttcaaacttggtgat
atcaacttgaatccagagaacaaacctgccatgctcgacactgtagatatggacgaagag
gagttggaaatgttaagtgaagcacgggccaggttggccaatacacagggcaaaaaagcc
aaacgaaaagttagagaaaagtttttggaagaaagtaggtatattgccgaattgcagaaa
agaagagaattgaaacaggcaggaattggaggaaccaaaaaaagaaagaaacaagataat
caggttgattatttatctgatgttccttttgaaagggctccatatcagggaacttatgat
gttgatgatgaaaatttagccaatctaaaagaaatggaggattaccaactcagggctaac
aagtatggtattcaagatcaggacgctcagaagcagaagagaaaacgaaagagagagaag
gaagatgagaagaagaaggatcaaatggctcaaatagtggtgtttgaagaactttatccc
actaaaaagaagaaactagacttgcccgaacccggatctgtggtcggtgatgaaatcaca
gatgacgccattattcaagctacgcaacaattaataaggcgatcccaaaaacaatcattt
ataggaagcaccgctgatgaactagaatcagaaagtactaatggtaaattggacaatgtt
aggccagcacctgtttctgcaaagaaggagaggaaacgattggttgctctaattcgaacc
aaattctcccagctgcccaagccgaagaataattttcaaattactcttccccacgaatcc
caagcttttgttactggtaatgaaaatgaaattcgtgatcaatacatcgatttaggagag
gcagagagaagaataaagcttcatgaagaggaagagtatttcaaatctctttcaagaaga
tcccaaacgattcaacgagggttgccattgccatcacctacagcaattccttctacgaac
aacttgttgcaggatctagttgaccaagaaataatgaaaatgatagaatcagactataat
caggtcaatgatgttccagggttcagaatcacacaattaacagaggaagagaaacaacaa
gcagatttggagatatttgaagaaataacaaagaaccaggacagcttcctgaaatttcag
gaccatctgagaaatttagatctgttcaaatcatttgagtacacaaagagtttcaggaac
ctccgatcacaatatttgaaaacccgcattgatgacatctcaaaactcgaatccacaatt
aatctacaaaatgaggatatcattgacaaacacaaccaattaattcaaagccttgaggag
ctgcagactctatcaattaaacttgacatggagtataacgtctttggtcactttcgtgag
aatgaacgcatggtgatccaagttcgaactgaagcacttcaagacgaagcggatgaagca
aagaaaattcaacgaaaggctgaactcaggtacaacaatcttcttgaaaatttaaatcac
taa

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