KEGG   Komagataella phaffii: PAS_chr1-3_0239
Entry
PAS_chr1-3_0239   CDS       T01092                                 
Name
(RefSeq) DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway
  KO
K14655  tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:5.4.99.28]
Organism
ppa  Komagataella phaffii
Pathway
ppa00740  Riboflavin metabolism
ppa01100  Metabolic pathways
ppa01240  Biosynthesis of cofactors
Module
ppa_M00911  Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PAS_chr1-3_0239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppa03016]
    PAS_chr1-3_0239
Enzymes [BR:ppa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     PAS_chr1-3_0239
Transfer RNA biogenesis [BR:ppa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PAS_chr1-3_0239
SSDB
Motif
Pfam: Inv-AAD PseudoU_synth_2 dCMP_cyt_deam_1 MafB19-deam DUF4695 DUF1823
Other DBs
NCBI-GeneID: 8196471
NCBI-ProteinID: XP_002489582
UniProt: C4QVM8
LinkDB
Position
1:448506..450149
AA seq 547 aa
MSKRLPQRDAHGFKVKKVVLDSHRKIEGNGVSIFEEESQGASYIKDYVHGLRRVTPYYFT
FLTHCKERWQDRKLIEVFKSEFRMKPFSYYYNAIANGEVKLNDQVANVDSVLRNGDLISH
RIHRHEPPVTLDEIEIAYEDDEITVINKPSGIPVHPTGRYRHNSITMIMKQEMGTIAHTC
NRLDRLTSGIMFLGKTAMKTAKMVQQIKERNVGKVYIAKCKGKFPLGLQVVDKPLLTIDP
RLTFNLVDLEDGKEAKTLFRRISYDTKDNTSIVKCMPLTGRTHQIRVHLQFIGYPIANDP
VYSSPYVWGLTLGKGFLHKENPGYLKEVSERSEKIGKTKQSTSWYYPEESGELLLEEGCE
VCGSELYSDPGVNDLILWLHAYRYYSHEQSWDYSTKMPKWSIEGHHREMMKLAIEEAKKC
DHTETAFNVGCIITDENGEIISRGYSREFEGNTHAEQCALMKLDYKLPPGSILYTTMEPC
SERLSGNKPCVNRIIDLKGEVITVFVGVVEPKKFIADNTGKRQLEDAGVNYLHIDGYEDE
ILALATR
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgagtaaaagacttccacagagagatgctcatgggttcaaagtgaagaaagttgttttg
gattctcataggaaaattgaaggaaacggtgtgagtatttttgaggaagaaagccaaggt
gcttcttatatcaaggattatgtgcatgggttaagacgagtaacaccgtattattttaca
tttttgactcattgtaaagaaagatggcaagatcgcaaattgatcgaagttttcaaatcc
gagttcagaatgaaaccgttttcatattactacaatgctattgcaaatggtgaagtgaag
ctaaacgatcaagtcgccaatgtcgattcagtactcagaaacggtgatctaataagccat
aggattcaccgtcatgaacctccagttactttggatgaaatagagattgcatacgaagat
gatgaaattacggtgattaataaaccaagtgggatacctgttcatcccactggaaggtac
agacacaactccataaccatgataatgaagcaagaaatgggaacaatcgctcatacttgt
aatcgtctggatagattaacaagtggaatcatgtttctggggaaaacagccatgaaaaca
gccaagatggttcagcagataaaggaacgtaatgttgggaaagtgtacatcgcaaagtgc
aaaggcaaatttcctctggggttgcaagttgttgacaagccccttttgaccattgaccca
aggttgacattcaatttagtagatttagaagatgggaaggaggccaagacgttgtttcga
cgtatctcatacgacactaaagacaatactagcattgttaagtgtatgcccttgacaggt
aggacgcatcagatcagagttcatctgcaatttattggatatcctattgctaatgacccg
gtgtattcatcaccatatgtatgggggctcactttgggaaagggctttctgcataaagag
aacccaggttatcttaaggaagtgagtgaaaggagtgagaagatcggaaaaactaaacag
agtacgtcctggtattatcccgaagaatctggtgagcttttattagaagaaggatgtgaa
gtttgtggatcagaactctatagtgatccaggcgtgaatgatctcatactatggttgcat
gcataccgttattactcgcatgaacagtcttgggattacagcaccaaaatgcctaaatgg
agtattgaaggtcatcacagagaaatgatgaaactagctattgaagaggcaaaaaaatgc
gaccacacagaaactgcgtttaatgtgggatgtatcattacggatgagaatggggagata
attagtagggggtacagtagagagttcgagggaaacactcacgctgaacaatgtgcgttg
atgaagttggattacaagttgcctcctggttccattctctatacgactatggagccatgt
tccgaaagattgagcggtaataagccatgcgtgaatcgaattattgatctcaagggagaa
gtcattaccgtttttgtgggtgttgtagagcccaagaagtttattgcggacaatacagga
aagagacaactggaggatgctggggtgaactatttgcatattgatgggtatgaagatgaa
atactggcattagctactagatag

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