Komagataella phaffii: PAS_chr1-3_0254
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Entry
PAS_chr1-3_0254 CDS
T01092
Name
(RefSeq) GTPase-activating protein for yeast Rab family members
KO
K20168
TBC1 domain family member 15
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr1-3_0254
Membrane trafficking [BR:
ppa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
PAS_chr1-3_0254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
8196486
NCBI-ProteinID:
XP_002489599
UniProt:
C4QVP5
LinkDB
All DBs
Position
1:complement(470731..472842)
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AA seq
703 aa
AA seq
DB search
MTDHVTSTAGKSQLLYAKSKVFLHLTKHKTGNVEGFLTITKRTASTSNKELAINFIPKSI
LNSEDVKTLEWFDLYGLDGEKEYSPYHEDANQTKQSSSNEPVKKAYITRPSNSSSTAYAF
GVTIGSLYSIAVRPPSIHWKGSIILHSTLGERLPPIFFHDDECPGFKRELSRKRKQFQPF
SENNLKGGEIPYWGGDRFITVLRKYAAVEANPAEKTILMINPTPSDLSTFIPQDAIERSN
DKTSLFGQGKWKLLTTMAKLTNFTKNKVNEVAQNFEQPEVKAISEDFESARVYLAKWALS
IEEEANRTRSKLILNDDYKSLLIEKLGKDFSSLVTPQDINNASRKDPLKKAEWDSYFDTN
GLPKITIQEIKDRIFHGGVDPEIRPQVWPYLLQVYPWDVSTQEKHSLEITLQEQYLDLKT
CWQTDINKRETDLFKDQKFRIEKDINRTDRDISIFKRLPEETSDDNEDVSVIKNPNLNTL
RTILITYNELNANLGYVQGMNDLLSPLYYVIRDETIVFWSFVKFMDRMERNFVRDQSGMR
LQMKTLNELTQFMLPEFYLHLEKCESNNLFFFFRMLLVWFKREFPYETILKLWEIFWTDY
YSSQFHLFFALALLDKHSNTIINNLSRFDEVLKYFNDLSMTENDVDDLLMRAELLFLKFR
SMVNVIDIKERYEGSAQLISSDLRDLIGTELVIQKENEPCSVE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccatgttacctcgacggctggcaagtcccaattgctctatgcgaagagcaaa
gtgttcttacacttaacaaagcacaagactggaaatgtggagggtttcctgactatcacc
aagaggactgcttctacttccaataaagagctcgccatcaatttcattccaaaatcaata
ctgaatagtgaagacgtgaagactctggagtggtttgacttgtacggcctggatggagag
aaggagtactcgccttatcacgaggatgcgaatcaaacgaagcaatcatcgagtaacgaa
cctgtcaaaaaggcttatattactagaccatctaactcatcttcaacagcatacgcattt
ggagtgacaattggttcactttactccattgcggtacgacctccttcaatccactggaaa
ggctcaatcatattgcattcaactttaggcgagagattacctccaatattctttcacgac
gatgagtgtccagggttcaagcgagagttaagccgaaaaagaaagcagtttcaacctttc
agtgaaaataatctcaaaggtggcgaaataccgtattggggaggtgatagattcattact
gtcttgcggaaatacgccgcggtagaggctaaccccgccgagaaaacaattttgatgatc
aacccaaccccttcagacttgtcaactttcattccacaagatgccatagagaggagtaat
gataagacctctctttttggacagggaaagtggaaacttttaactacgatggctaagttg
accaatttcactaagaataaggtgaacgaggtagcccaaaattttgaacaacctgaagtg
aaagccattagtgaggattttgagagtgcgagagtgtaccttgccaaatgggcgctttca
attgaagaagaagcaaacagaactcgctccaagttgatcttgaacgatgactacaaatct
ctattgatagagaagttgggaaaggatttttcttcgttggttactccacaagacattaac
aacgcctctaggaaggaccccttgaagaaagctgaatgggactcttattttgacactaat
ggattacccaaaataactattcaagagatcaaggatcggatttttcatggaggcgtagac
cctgaaataagacctcaagtttggccttatcttctacaagtttatccatgggatgtttcc
acccaagaaaagcacagtttggaaatcacgctgcaggaacaatatctagatttgaagaca
tgctggcagacagatatcaacaagcgtgagactgacttgttcaaagatcaaaaattccgc
attgaaaaggacattaatcgaactgacagggacattagcatttttaagagattaccagaa
gagacttcggatgacaatgaagacgtatcagtcattaaaaatccaaatctaaacactttg
aggacgatattgatcacttacaatgagctgaatgcaaatttaggttatgttcaaggaatg
aacgaccttctttcaccgttgtactatgtcatcagagatgaaacaatagtgttttggagt
tttgttaagttcatggatcgtatggaaagaaattttgtaagagatcagtcaggaatgcga
ttgcaaatgaaaacgctaaacgagttgactcagtttatgttacctgagttttacttgcat
ttagaaaaatgtgagtctaacaacttgttcttctttttccgaatgctgctagtttggttc
aagagggagtttccttacgagactatactcaagttgtgggaaattttttggacagattac
tattcgtctcagttccatctattctttgcccttgcactgttggataaacattcaaacacc
atcatcaataacttatccagatttgatgaagtcctgaagtatttcaatgatttatcaatg
acagagaatgatgtagacgatctacttatgagagcagaactattgttcctgaagttcaga
tcgatggtgaacgtgatagatatcaaagaaagatacgaaggaagtgcgcaattgatctcc
tcggatcttagggacttaattggaacggagttagtgattcagaaggaaaatgaaccttgc
tcagtcgagtga
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