Komagataella phaffii: PAS_chr1-4_0022
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Entry
PAS_chr1-4_0022 CDS
T01092
Name
(RefSeq) Mitochondrial RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppa03029
]
PAS_chr1-4_0022
Enzymes [BR:
ppa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAS_chr1-4_0022
Mitochondrial biogenesis [BR:
ppa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
PAS_chr1-4_0022
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
8196862
NCBI-ProteinID:
XP_002490137
UniProt:
C4QX83
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Position
1:complement(1449992..1453957)
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AA seq
1321 aa
AA seq
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MVCYATRKSYGTAFVGTQSLCRPMGPTLPQDQYSHIFDSLKKSMKKPLVHSGNDEALDYF
SSPNDKVFRNTNAKELNHLWTLLEACAISNDFLRGKKIMENLFHTSNKAEFQIAYAKYLL
SWSKSPVSLMELEEYVLKESPILFPTLEFDSKIASILVRKCLTSGSFDNRYQTIITKYIK
SSSGNRIEDLFKHLDILGFDNAIIILKAYHLGRESIPSRYRDIFDLKDEAFAIPSLHSTT
KESNNSHKCIEEKIAAPTYFEDETQLPPSLDKDAQHLIGVDTFGLKVIRHSLLGLQAKPT
NSNGELFSKLESFDESYAPIEFGDEQLSDRTINFFEIKKLLKTPQQQEDFEKFLDAYNAE
RQRLLEFQSLDGAKRKWEQTLEDFKESNVVNVPSKSIKNYLWKWHSKLLPLIKEEVLKCQ
KTLSIIGAGNLNSYKTKLSTMERKAFNERLEYANYLILVSPDKMSTLTILELLKIIFTGK
NTTGIRTARAVISVGKAVELEYRSERLLSKEIDVFKNFRNMKNSKEFKRLVTTGSKNTFT
KLLQQSRSASIDTELEETLFNWPNEIKAKIGSVLISLLLQSAKIDVQGKDPITNEEVHGQ
VPAIFHQYQYANGNKIGILKFHHDFTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGY
YYTETSLIRTKDSPEQLAYVKAASENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNS
GNQFLDIPAIQDSPIYPPQPPSDADPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETA
RGFIGERIYFPHNLDFRGRAYPISPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLA
NLYGLDKETLDKREQFTDLNKANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKL
KNPNMFVSHIPVHQDGTCNGLQHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRV
DIDATNGHQLALKLQRHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKEIFGDDDPDTHV
AGRYLALQVFSSIRELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLA
SVIWTSPLGLPIVQPYRSIGKKQVATNLQTVFISDPHAVSPVDSRKQTNAFPPNYIHSLD
ASHMLLSSIECGQRRLSFAAVHDSYWTHAADVDIMNEILRDAFVKLHETDLVQDLKDEFD
RRYHGFLVVESVSKKSFIGKQIQELRQEFSKRLGRKITTADEIYLEKQRQEYLMSSDPTT
RKLGEKMVTTVSILENVDIDSLKPINSMDKFSILAPFKLPEIPAKGTFDVRLVKDSTYFF
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggtatgttatgctactagaaagagttacggaactgcatttgttggcacacaatctttg
tgtcgaccaatgggccctactctgcctcaagaccaatactcgcatatttttgattcttta
aagaagtctatgaagaaaccactcgtccatagtggaaacgatgaagctttggattacttc
agctctcccaatgataaagtttttaggaatacaaatgcgaaggagctgaaccatttgtgg
actctactggaagcttgtgcaatttccaatgatttccttagaggcaagaaaataatggaa
aatttgtttcacactagcaacaaggctgagtttcagattgcatatgctaagtatttgtta
agctggtctaaaagtcctgtaagtttaatggagctagaagaatatgtgttaaaagagtca
cctattttatttccgacactggaattcgattcgaagattgcaagtattctggtgagaaaa
tgtttgacctcaggttcatttgacaacagataccagacaataatcactaagtacatcaaa
tcaagttccggtaacagaattgaggatttgttcaagcatctggatatacttggatttgac
aatgctattattatattgaaggcttaccatctaggccgtgagtctattccttcaaggtat
agagatattttcgatttaaaagacgaagcctttgcgattccctcattgcactctacaacc
aaggaaagtaacaattctcataaatgcattgaagaaaaaattgcggcacctacctatttt
gaagatgagacccagcttccaccatctttagacaaggacgctcaacatcttattggggtg
gatacctttggcctcaaagtaatacgtcactctttattaggcttacaggccaaacctaca
aattccaatggggagctttttagtaaacttgaatcgtttgatgaaagctatgctccaatc
gaattcggtgacgaacaattgtcggataggaccataaatttctttgaaatcaaaaaactt
ttaaaaacaccacagcaacaagaagattttgagaaatttctggacgcctacaatgctgag
cggcagagactgctggagtttcaatcattggacggagccaaacggaaatgggaacaaacc
ttggaagatttcaaagaaagcaatgtagtcaatgttccttccaagagtatcaaaaattat
ttgtggaagtggcatagcaagctactcccgctgatcaaagaagaagtcttaaaatgccaa
aagacactatctattattggagcaggtaatcttaactcttacaagacgaaactttctacg
atggaacgcaaggcgtttaatgaaagattggagtatgctaattacttaatattagtctcc
ccggacaagatgagcacattaacgattttggagcttttaaagataatctttaccggaaaa
aatactactggaatccgtaccgctcgagctgtcataagtgttggcaaagcggtggaactt
gaatatcgctcagaaagacttctttcaaaggagatagatgtattcaaaaacttccgaaat
atgaagaacagcaaggaattcaaaagactcgtcactacaggctccaagaacacctttaca
aaactactacaacaaagtaggtctgctagcattgacaccgagcttgaggagacattattt
aattggccaaacgagataaaagcaaaaattgggtctgttttaatatcactactattgcaa
tctgctaagatcgatgttcaagggaaggatccaattaccaacgaagaagttcatggacaa
gttcctgccatatttcaccaataccaatacgctaatgggaacaaaataggcattctaaaa
ttccatcatgatttcactagtaagttgagtaaagacaacctcagcggcgcagttcaaccg
caataccttcccatgttagtcaggcctaaaccttggctatcgcataacttaggagggtat
tactacaccgaaacttctcttattagaaccaaagattcccctgaacagctggcttatgtc
aaagccgcttctgaaaataatacaattgataaagtttaccaagggttgaccgttttggga
aatacaccctggaccattaattccgaaatatttaatgtcataagcgaagtatggaattct
ggaaatcagtttctagacatacctgctattcaggacagccccatatatcctccacagccc
ccttcagatgctgatccttctgtaataagggactggaagtatcaagtgcgaaaagtctcc
aataagttttcttctgatagatccatgcgctgtgatgctaattacaaattggaaacagcg
cgtgggtttataggcgaaagaatatattttcctcacaacttagattttagaggacgggct
tatcccatctcacctcatttaaatcatctgggcaacgatatgagtcgagggctgctttta
ttttgggaaggaaaagagcttggagaaaggggattgaggtggctaaaaattcaccttgct
aacctttacggactggacaaggagactttggataagagagagcaattcacagacctcaat
aaagcaaatattatagactccgccacaaaacctttagctggtaaaggatggtggaagtct
tcagaaaagccttggcaaacactgtctgtttgcattgaattagcagaggcgtggaaactg
aaaaatcctaacatgtttgtttctcatattcctgtacaccaagatggaacttgtaatggg
ctacaacactatgctgctttaggaggagatgtagagggagcgactcaagtgaatctaatg
cctgataataaaccaaatgatgtgtattcgtatgttgcaaaacttgtgcagaagcgggtc
gatatcgacgctaccaatggacaccagcttgctctgaaattacagaggcacataaaacgc
aaagttgtcaaacaaactgtgatgacaagtgtttatggagtgacttatatcggagcttct
gatcagatagaccgtcggttgaaagaaatttttggcgacgatgatcctgatacacatgtt
gctggccgatatttggctcttcaagtattcagttccattcgtgagttgtttactggagca
caccaaattcaagactggcttgctgaagcctccaagaagattaccaaatcaattcggatg
gatatcgatacatctatgacaaaaaaatcatcgaaatctgctaagatttcacatttagca
tccgtgatttggacatcacctttgggattacctattgtacagccatatcgcagtattggg
aaaaagcaggtagcaacaaatcttcagacagttttcatttcagatcctcacgcagtgagt
ccagtagactcaagaaaacaaactaacgcttttccccctaattatatacattcgttagat
gcatcccatatgcttctttcttccattgaatgcggtcaaaggaggttatcattcgctgca
gtacatgactcttattggacccatgcagcagatgtcgatatcatgaatgaaattttgaga
gatgcttttgtaaaactacatgagacagatttggttcaagatctaaaagatgaattcgat
cgtcggtaccatgggtttctagtagttgaatctgtcagtaaaaagtcatttattggtaaa
caaatccaagagcttcgacaagaattttctaaacggcttggacgaaagatcaccacagca
gatgaaatatatctagaaaaacaacgacaggagtatttgatgtcgtcagacccaacaaca
aggaaacttggtgagaagatggtaaccacagttagcattcttgaaaatgtcgatattgac
tctttgaagcccataaatagcatggacaaattcagcattctagccccgttcaaacttcca
gaaatcccagccaagggtacgtttgatgtaagattggtgaaagatagtacctattttttt
agctaa
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