Komagataella phaffii: PAS_chr1-4_0024
Help
Entry
PAS_chr1-4_0024 CDS
T01092
Name
(RefSeq) cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex
KO
K08490
syntaxin 5
Organism
ppa
Komagataella phaffii
Pathway
ppa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PAS_chr1-4_0024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr1-4_0024
Membrane trafficking [BR:
ppa04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
PAS_chr1-4_0024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Syntaxin-18_N
MCPsignal
DUF16
Glyco_hydro_100
F_actin_bind
V-SNARE
CUB_animal
Motif
Other DBs
NCBI-GeneID:
8196864
NCBI-ProteinID:
XP_002490139
UniProt:
C4QX85
LinkDB
All DBs
Position
1:complement(1455303..1456202)
Genome browser
AA seq
299 aa
AA seq
DB search
MTSIQNRTLEFQQCVKTFNKQLNIKTSNAPTSPPSKSDFSKKASVIAKDIARVTQLLRKL
TILIKDTPRFNDRPIEINELTYVIKQDIFKVEKSLKQLQQQFRGGTGQVDSFNKNVVNLL
NTKTQGVSQSFKEILEIRQHNEISQRSRQEQYAADDTNDFNYLTLRSQKNASSISENPFS
SSTNETIPADTLMLPESNQLLLLEEQSNVYLQDRNRAVETIESTISEIGNLFQQLSNMVS
EQGEVIQRIDSNVEDISFNIHGAQRELIKYFHNVSTNRWLMLKIFGILVIFFVLWALVS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatacagaatcgcactttggagtttcagcagtgtgtgaaaaccttcaacaaa
caactaaatataaaaacaagcaacgcaccaacatctcctccttcaaaaagtgacttctct
aaaaaagcaagcgttatagccaaagatattgctcgagtcactcaactgctgagaaagttg
acgatactgataaaggatacgccacggtttaacgatcgacctatcgaaatcaatgagttg
acctatgtgattaagcaggacatcttcaaggtggaaaagagtttgaaacaactacagcag
cagtttcgtggaggcaccggacaggttgacagttttaacaagaacgtagtgaatcttctg
aacacaaaaacacagggagtcagtcaaagttttaaagagatattggaaataaggcaacac
aatgaaatatctcaaagatcccgacaggaacaatatgccgccgatgatacaaatgacttc
aactacttgactcttcgaagtcaaaaaaatgccagctcaatatcagagaatccgttttcc
tcttcaacaaacgaaactatccccgctgatactttgatgctgcctgaatcgaatcagctg
ttactgttggaagaacaatctaatgtctatcttcaggacaggaatagagcggttgaaaca
attgaatctacgatcagtgagattgggaatctgttccaacaactatcaaacatggtctcc
gaacaaggtgaggtgatccagcgaatagattctaatgtggaagatatttcattcaatatt
catggtgcacagcgggaacttataaagtatttccacaatgtatccaccaatcgttggctc
atgttaaagatatttggaatattggttattttttttgttctgtgggccttggtgagttga
DBGET
integrated database retrieval system
