Komagataella phaffii: PAS_chr1-4_0066
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Entry
PAS_chr1-4_0066 CDS
T01092
Name
(RefSeq) Effector of Rab GTPase Sec4p, forms a complex with Sec4p and t-SNARE Sec9p
KO
K08518
syntaxin-binding protein 5
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr1-4_0066
Membrane trafficking [BR:
ppa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
PAS_chr1-4_0066
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
PAS_chr1-4_0066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lgl_C
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
WDR55
Beta-prop_VPS8
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
8197283
NCBI-ProteinID:
XP_002490176
UniProt:
C4QXC2
LinkDB
All DBs
Position
1:1532069..1535155
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AA seq
1028 aa
AA seq
DB search
MFKRKQKSTDSGAQPMPSSTGKLLDMNKVLDKGLSSGVSNKSFQLTDLSRYGVTGGILCM
AFDPIQSLLAISTGKGEVHVFGQKKVEVAFVLESSLQLITLKFVKGIYLVAIDAKSTIFV
FSLHSKKLLYTYSAPGIITSVETDYSLEFLIIGLQNGSCIFYDISIGKVTPYRIGNLQRK
VLPSIKYVSPVLSVKWHPRDIGTVLIAYTHVSVIYSFVTDEIKQEFIYKPPNGQNVQLVT
ALWHPNGLNIVTLYDDNSFVFWDSNDGTILQARTLYDTYINQSTSIPDTQGLSPIIKISW
ICAKDPEHTQLVICGGDTPEKLGAQNLTLLDFGQTPKYSVTSYENMGKYYAFPKSQRVMP
IHNSTAIIDFLPLGEASPYFGGNHDPRYILVLSDSGDLKLVSFPLGTINYEAGILPPTLT
WMNPKISCSRACPVPRSQWLGMLSVSTASKVRPLLKGGSSQKKSDSAYSLASALITGHEN
GFIRMWDASSGELDVYSLLEIDLTKILQDDSNDVTVTNVSFAADTAELAVSTLNGHVLLF
KFAKNYNYNSKVSDLNQRFKSMNLKHDNKDPNSLSAQILNDISDRTPLDLKEGFLPVSYI
RKNSGKVTSLINSNVGFVGICYESGELMIIDRRGPSILFSIFLSELCEGTPIYGTCLEVG
VMALNEDTFSSLVLLLGTNRGDLLRFQIIPSSNGSFQVKFYDIFIGATNGPLCQLTCIDR
ETGAFTIATLGHFKKLSNGVVIRSLIIASSNSDIRILDNKLHRVTHKTIKSGVATCGVSV
IPNSNQGSSPVFNVLSKSNDIKVYSLPSLREITTLILPYPVSTDYLAYSSVIANGEILVR
INESEAGLVDIVGHSTAELSPTRNIDQLFNDSLIIPYRPTVNTVQYLKRGTKLISYQDLI
QLMYGGNVSLRNPTPDSELAFQISPYNPNNQGVLNSMVNSPLLKSPSKFGEEGGSQDEEF
NYNKPIRKHHVATVNPLKQAYRSIQSGIESLDEAGNDYASNFKEGLNSTIGEAQTGILKA
GLRSKLGW
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaagaaaacaaaagtcaacagattcaggagctcagcccatgccgagctccact
ggcaaattacttgacatgaacaaagttttggacaagggtctgtcttcaggtgtatcaaat
aaatcgtttcaattgactgatttatcaaggtatggtgtcactggtggtattttgtgtatg
gcatttgatcctatccagagtctcttagcaatatcaacaggtaagggggaggtgcacgtt
tttggacaaaagaaagtcgaagttgcgtttgtgttagaatccagtttgcagctcattacc
ctcaaattcgttaagggtatttatttagtagcaattgatgccaaaagcaccatttttgtg
ttttcactacattccaagaagctattgtacacttattctgcaccaggtatcatcacctcc
gttgaaacagactattcacttgagtttttgataataggccttcaaaacggttcttgtatc
ttttacgatatcagcattggcaaagtaactccatacagaattggtaatctgcagagaaaa
gtattaccttcaattaagtatgtgagtccagttctatctgtcaagtggcatccgagagat
atagggaccgtactaatcgcctatacacatgtctccgtcatatattcatttgtcacagat
gaaatcaagcaagaatttatatataagccaccaaacggccaaaacgttcaactggtaaca
gccttgtggcatcctaatggcctaaacatagtcactttgtacgatgacaattcatttgta
ttttgggattctaatgatggtactattctgcaggcgagaactctttacgacacatacatc
aatcagtctacttccataccagatacgcaagggttgtcaccaataatcaagatctcctgg
atatgtgctaaggacccagaacatactcagcttgttatatgtggaggtgatacaccggag
aagttaggtgcccagaatttaacactgttagactttgggcaaactccaaagtactcggtt
acctcttatgaaaatatgggaaagtactacgctttccccaaatctcagcgagtaatgcct
attcacaatagcacggccataattgactttcttcctttgggcgaagcaagtccgtatttt
ggcggtaaccacgacccaaggtatatattggtcttatcggatagtggtgatttgaagctt
gtaagctttccactggggaccatcaactacgaggccggaatcctgcctccaacactaaca
tggatgaacccaaagatatcttgttcacgtgcctgtccggttccaagaagccagtggttg
ggtatgctgagcgtttcaactgcaagcaaagttcggcctctgcttaaaggtggaagctca
caaaaaaaatcagatagtgcgtattcactggcatcagcattgataacagggcatgagaat
ggattcatcagaatgtgggacgcatcttctggagaacttgacgtttattccttgcttgaa
attgaccttactaagatcttacaggatgactctaacgatgttactgtgacaaatgtttcg
tttgccgctgacactgccgagctcgcagtttccactttgaacggacacgttttactcttc
aagtttgcaaagaactataactacaattctaaagtgtcggatttaaatcagcgatttaaa
agtatgaacttgaagcatgataataaagaccctaacagtcttagtgctcagattctcaac
gatataagcgatcgcacacctttagacttgaaggaaggctttttacctgtatcttatatt
cgaaagaattcaggaaaagtaacctcattgataaacagcaacgtaggttttgttggtatt
tgttacgaatcaggggagttaatgatcattgatagacgaggcccctctatacttttttcg
atatttctcagcgagctttgtgaaggtactcctatatatggtacttgcttagaggtggga
gtaatggcattgaatgaagatacattttcgtccttagttttgttattaggaacaaacaga
ggagacctgttacgatttcaaattattccaagttcaaatggaagtttccaggtaaagttt
tatgacatttttattggtgctacgaatggaccattatgtcaattgacttgtattgatagg
gagacaggagcattcacgattgcaactttaggtcatttcaagaaattgtctaatggtgtg
gtcatccgaagcctgattattgcttcaagtaactcagatatcagaatcttagataataag
ctgcacagagtaacacacaaaacgatcaaaagcggagttgctacgtgcggagtctcggtt
atacctaactcaaatcagggaagttctccagtatttaacgttctatctaagtcaaatgat
atcaaggtttattctttaccatccctgagggagataacgactttaatactgccatatccc
gtcagcacagattatttggcatatagttccgtgattgcgaatggtgaaatcttggtacgg
atcaatgagagcgaagctgggcttgtggatattgttggacattcaactgcagaactgtct
ccaacaaggaatattgaccaactattcaatgattctttgattatcccatacagaccaact
gttaatactgtacagtatcttaaaagaggaaccaaactgatatcttatcaagatcttatc
cagttaatgtacggagggaacgtctctttacgaaatccaactccagattccgaattggcc
tttcaaatatcaccctacaaccccaataaccaaggagttttgaactctatggttaacagt
ccactattgaagtctccatcgaaatttggcgaggaaggtggttctcaagatgaagaattt
aactacaataaaccgattcgcaagcaccacgttgctaccgtcaatcctttgaaacaagca
tacaggtccatacagagtggtatcgaatctttagatgaagctggcaatgattatgccagt
aatttcaaagaaggattaaattcaacaatcggcgaagcacaaactggtatattaaaggca
ggccttcgatcgaagcttgggtggtag
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integrated database retrieval system
