KEGG   Komagataella phaffii: PAS_chr1-4_0092
Entry
PAS_chr1-4_0092   CDS       T01092                                 
Name
(RefSeq) exosome component
  KO
K12587  exosome complex component MTR3
Organism
ppa  Komagataella phaffii
Pathway
ppa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PAS_chr1-4_0092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppa03019]
    PAS_chr1-4_0092
Messenger RNA biogenesis [BR:ppa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PAS_chr1-4_0092
SSDB
Motif
Pfam: RNase_PH VAR1
Other DBs
NCBI-GeneID: 8197309
NCBI-ProteinID: XP_002490202
UniProt: C4QXE8
LinkDB
Position
1:1575359..1576141
AA seq 260 aa
MTDRRRILGPLDASPLTFESESVISALEGEASSKFQLKKLHVSQPSSGDDKIFVDMGLVT
NCEGSCYMEIDNTLIQVSVYGPRPIRGSFIDTATLSVECRFLPFLTESKEFANGNGRNSL
TEIEQRLSSFVYSCFVNTIILSKYPKSSIDIFIKVISVDSYDTNFIKLTNYLVNCASLSI
VDAQIEVKDIITAGYIPTSIVTSFTNLHLPNDKIVGLYISDDTDAEIDDEKVLSSMIMEC
NKKARDLRSSLNKYLIQLVK
NT seq 783 nt   +upstreamnt  +downstreamnt
atgaccgatagacgaagaatattggggccattggacgcttctccgctaacctttgagtct
gaatcagttatttcggctcttgaaggggaggcgagctccaagtttcaactgaaaaagttg
catgtatctcagccatcatctggcgatgataagatttttgttgacatgggattagtaaca
aattgtgaaggatcctgctatatggaaatagataatactcttatacaggtatctgtttat
gggcctaggccgattcgtgggtctttcattgatactgcaactctttctgtcgaatgtagg
tttcttcctttcctaacggagtctaaagaatttgccaacggtaatggaaggaatagtctc
acagaaatagagcaaagactatcttcttttgtgtacagctgctttgtgaacacaatcatt
ctttccaagtacccaaaatcgtcgatagacattttcattaaggttatttcagtggattcc
tatgacacaaatttcatcaagctaactaactacctcgttaattgtgcttccttatcgata
gtagacgcccaaatcgaagtgaaagatataataacagcaggatacattccaacttccata
gtgaccagttttactaatcttcatttgcctaacgacaagattgtaggtttatacatctcc
gacgatacagatgccgaaatcgacgacgaaaaagttttgtctagcatgataatggaatgc
aacaagaaagcaagagacctgcgatccagcctaaacaagtatctaattcaattggtcaag
taa

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