Komagataella phaffii: PAS_chr1-4_0121
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Entry
PAS_chr1-4_0121 CDS
T01092
Name
(RefSeq) Transcription initiation factor IIA small subunit
KO
K03123
transcription initiation factor TFIIA small subunit
Organism
ppa
Komagataella phaffii
Pathway
ppa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAS_chr1-4_0121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0121
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
PAS_chr1-4_0121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA_gamma_C
TFIIA_gamma_N
DUF7084
Motif
Other DBs
NCBI-GeneID:
8197337
NCBI-ProteinID:
XP_002490231
UniProt:
C4QXH7
LinkDB
All DBs
Position
1:complement(join(1628452..1628701,1628759..1628800,1628859..1628899))
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AA seq
110 aa
AA seq
DB search
MNGPGYYELYRKSTIGTTLTDALDTLILDQRIQPQLALRILSNFDRVVADTMKEKAKTKI
SFKGHLHTYRFCDDVWTFIIKDLGITLDQKETVRTDKFKIVACSAATKGT
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaccaggatactacgagttgtaccgaaagagcacaattggaactacactgacc
gatgccctggatacattgattttagatcaaagaatccagcctcagttggctctacgtatc
ctgtccaattttgacagagttgttgctgacacgatgaaagagaaggctaaaaccaagatt
tcatttaagggacatctccatacttatcgattctgtgacgatgtctggacttttattatt
aaagatttgggaattacattagatcaaaaggaaactgttcgtactgacaagtttaagatt
gtggcatgctcggcagctaccaaaggtacttag
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