KEGG   Komagataella phaffii: PAS_chr1-4_0162
Entry
PAS_chr1-4_0162   CDS       T01092                                 
Name
(RefSeq) GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
  KO
K07888  Ras-related protein Rab-5B
Organism
ppa  Komagataella phaffii
Pathway
ppa04144  Endocytosis
ppa04145  Phagosome
ppa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PAS_chr1-4_0162
   04145 Phagosome
    PAS_chr1-4_0162
   04148 Efferocytosis
    PAS_chr1-4_0162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppa04131]
    PAS_chr1-4_0162
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppa04147]
    PAS_chr1-4_0162
   04031 GTP-binding proteins [BR:ppa04031]
    PAS_chr1-4_0162
Membrane trafficking [BR:ppa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    PAS_chr1-4_0162
 Endosome - Lysosome transport
    PAS_chr1-4_0162
Exosome [BR:ppa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PAS_chr1-4_0162
  Exosomal proteins of other body fluids (saliva and urine)
   PAS_chr1-4_0162
  Exosomal proteins of colorectal cancer cells
   PAS_chr1-4_0162
  Exosomal proteins of melanoma cells
   PAS_chr1-4_0162
GTP-binding proteins [BR:ppa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    PAS_chr1-4_0162
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase MMR_HSR1 Gtr1_RagA GTP_EFTU AAA_16 TniB
Other DBs
NCBI-GeneID: 8197146
NCBI-ProteinID: XP_002490273
UniProt: C4QXL9
LinkDB
Position
1:complement(join(1705574..1706136,1706203..1706260))
AA seq 206 aa
MADLVTQEPRFAQFKLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGAAFLTQTIQLDER
TTIKFEIWDTAGQERYKSLAPMYYRNANCALVAYDITQESSLDRAKSWIQELQKQASADI
VVALVGNKLDLEAERKVSTKEAKEYADELGLIFKEISAKTGEGIKDVFHSIASKLPVEEK
LNSATKRRRNIDLNRPSTNNQESCSC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctgatttagttacacaagagcccagatttgcccagttcaagcttgttttattgggg
gaaagtgctgttggaaagtcctctatcgtacatcgtttcgtcaccgactcctttgacgat
ttgagagagtcaacaataggagccgcatttttaacccaaactattcagctagatgaaagg
accacaatcaaatttgagatttgggataccgctggccaggagagatacaagtctttggcc
ccaatgtactatagaaatgccaactgtgcacttgttgcttacgacataacacaagaatct
tccttggatagagctaaatcctggattcaggaactacagaaacaggctagcgctgacatc
gtcgtggccttggtgggaaataagctggatttggaagccgaacgtaaggtttcaaccaag
gaggccaaggagtacgcggatgaattggggctcattttcaaggaaataagtgctaaaaca
ggcgaaggaataaaggatgttttccattcgattgcctccaagttaccagttgaagagaaa
ctgaattcagctaccaagagacgtcgcaacatcgatttgaaccgaccatctacgaacaac
caagagtcttgtagctgctag

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