KEGG   Komagataella phaffii: PAS_chr1-4_0183
Entry
PAS_chr1-4_0183   CDS       T01092                                 
Name
(RefSeq) TATA-binding protein, general transcription factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ppa  Komagataella phaffii
Pathway
ppa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PAS_chr1-4_0183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppa03000]
    PAS_chr1-4_0183
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr1-4_0183
Transcription factors [BR:ppa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    PAS_chr1-4_0183
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PAS_chr1-4_0183
  RNA polymerase III system
    TFIIIB
     PAS_chr1-4_0183
  RNA polymerase I system
    SL1/TIF-1B
     PAS_chr1-4_0183
SSDB
Motif
Pfam: TBP DUF4295
Other DBs
NCBI-GeneID: 8197165
NCBI-ProteinID: XP_002490297
UniProt: C4QXP3
Structure
LinkDB
Position
1:1739483..1740214
AA seq 243 aa
MDSLKLPTTAAQAKAFTSSGSLSFPMNNDDMIKADPSQTEQHIIKQDIEPEIKDVVVSDD
ANSSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFA
SGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAF
SHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYQAFEAIYPVLSEF
RKS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggattccctcaaattgcctacaactgccgctcaggcaaaggcttttacatccagcgga
tccctttcctttcccatgaataatgacgacatgattaaggcagatccttctcagactgaa
cagcacattatcaaacaagacatagaaccagaaataaaagatgttgttgtcagcgacgac
gctaacagctcaggtatcgttcccacgttacagaatatcgtggctactgttaatctcgat
tgtcgtttagatttgaaaactatcgctttacacgcaagaaacgctgaatacaatcccaag
cgttttgctgctgttatcatgagaataagagagcctaagacgacggccctgattttcgca
tcaggaaaaatggttgtcactggtgctaagtccgaggatgattctaagctagcatctaga
aaatacgcgcgtatcatacaaaaactggggtttaacgctaagtttactgattttaaaatt
caaaacattgtgggttcttgtgatgttaagtttcctatcagattggaaggtttggccttt
tcacatggacatttcagttcttatgagcctgaattgtttcctggtctaatttatagaatg
gtgaaacctaagattgtgctgctgatctttgtgagcggcaagattgtattgacaggtgcc
aagaagagagaagagatctaccaagcttttgaagccatatatcctgtgttgagcgagttt
cgaaagagttga

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