Komagataella phaffii: PAS_chr1-4_0183
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Entry
PAS_chr1-4_0183 CDS
T01092
Name
(RefSeq) TATA-binding protein, general transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ppa
Komagataella phaffii
Pathway
ppa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAS_chr1-4_0183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppa03000
]
PAS_chr1-4_0183
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0183
Transcription factors [BR:
ppa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PAS_chr1-4_0183
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PAS_chr1-4_0183
RNA polymerase III system
TFIIIB
PAS_chr1-4_0183
RNA polymerase I system
SL1/TIF-1B
PAS_chr1-4_0183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
8197165
NCBI-ProteinID:
XP_002490297
UniProt:
C4QXP3
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:1739483..1740214
Genome browser
AA seq
243 aa
AA seq
DB search
MDSLKLPTTAAQAKAFTSSGSLSFPMNNDDMIKADPSQTEQHIIKQDIEPEIKDVVVSDD
ANSSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFA
SGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAF
SHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYQAFEAIYPVLSEF
RKS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggattccctcaaattgcctacaactgccgctcaggcaaaggcttttacatccagcgga
tccctttcctttcccatgaataatgacgacatgattaaggcagatccttctcagactgaa
cagcacattatcaaacaagacatagaaccagaaataaaagatgttgttgtcagcgacgac
gctaacagctcaggtatcgttcccacgttacagaatatcgtggctactgttaatctcgat
tgtcgtttagatttgaaaactatcgctttacacgcaagaaacgctgaatacaatcccaag
cgttttgctgctgttatcatgagaataagagagcctaagacgacggccctgattttcgca
tcaggaaaaatggttgtcactggtgctaagtccgaggatgattctaagctagcatctaga
aaatacgcgcgtatcatacaaaaactggggtttaacgctaagtttactgattttaaaatt
caaaacattgtgggttcttgtgatgttaagtttcctatcagattggaaggtttggccttt
tcacatggacatttcagttcttatgagcctgaattgtttcctggtctaatttatagaatg
gtgaaacctaagattgtgctgctgatctttgtgagcggcaagattgtattgacaggtgcc
aagaagagagaagagatctaccaagcttttgaagccatatatcctgtgttgagcgagttt
cgaaagagttga
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