Komagataella phaffii: PAS_chr1-4_0265
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Entry
PAS_chr1-4_0265 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K03140
transcription initiation factor TFIID/TFIIF subunit
Organism
ppa
Komagataella phaffii
Pathway
ppa03022
Basal transcription factors
ppa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAS_chr1-4_0265
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PAS_chr1-4_0265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0265
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr1-4_0265
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PAS_chr1-4_0265
Coactivators
SWI/SNF complex
PAS_chr1-4_0265
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA3 complex
PAS_chr1-4_0265
Chromatin remodeling factors
INO80 complex (yeast)
PAS_chr1-4_0265
SWI/SNF complex
PAS_chr1-4_0265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YEATS
pYEATS
BET
Phage_TAC_15
AHD
Motif
Other DBs
NCBI-GeneID:
8196937
NCBI-ProteinID:
XP_002490380
UniProt:
C4QXX6
LinkDB
All DBs
Position
1:complement(join(1887617..1888351,1888418..1888426))
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AA seq
247 aa
AA seq
DB search
MSDLKRTVRITTTQNVLKDIPPIEKGFPMRKWSISVSLLNDQGKEIPATIFDKVTYHLHP
TFENPVRVFKQPPFKIEEQGWGEFDMKIALTIAEKGGERKISHDLNFLKEKYIVDHVISV
PTNKPGLLALLAESGPVPSSEGATTPGLSSVTEKRKTSLVGDVKAKKVKTSSGAVKGGVD
LEKLADGLTKLSEDDLLGVVQMVTDNRSPEMNIKNDVDEGEFTMDLYSLPDSLLKSLWEY
VKKHADV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttaaaacgtaccgtgagaattactacgactcagaacgtactcaaggatata
ccgcccatagagaaagggttcccgatgaggaaatggtcaatttccgtgtctttacttaat
gatcaaggcaaggaaatcccagctaccatctttgacaaagttacttaccacctgcatccc
acttttgagaatccagttcgtgtgttcaagcagcctccgttcaagatcgaagagcaggga
tggggagagtttgacatgaaaatcgctttgaccattgctgaaaaaggaggagaacgcaaa
atcagccatgatttgaactttttgaaagaaaaatacattgtggaccacgtaatctctgtt
ccaaccaacaaacctggactattggccctgttagctgagagtgggccggttccttcgtcc
gagggggccaccactccagggctgtcgagtgtaacagaaaaacgtaaaaccagcttggtt
ggtgatgttaaagcaaaaaaggtcaagactagttctggtgccgtaaaaggtggtgttgat
ttggagaagttggccgatgggctgactaagttgtccgaagatgacctcttgggggtagtt
caaatggttaccgacaacaggtcgcccgagatgaatatcaagaacgatgtggacgaggga
gagtttacaatggatttgtacagtcttcctgacagtctactgaagagtctgtgggaatac
gtcaagaaacatgctgatgtgtag
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