Komagataella phaffii: PAS_chr1-4_0269
Help
Entry
PAS_chr1-4_0269 CDS
T01092
Name
(RefSeq) Replication factor C subunit
KO
K10754
replication factor C subunit 1
Organism
ppa
Komagataella phaffii
Pathway
ppa03030
DNA replication
ppa03410
Base excision repair
ppa03420
Nucleotide excision repair
ppa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAS_chr1-4_0269
03410 Base excision repair
PAS_chr1-4_0269
03420 Nucleotide excision repair
PAS_chr1-4_0269
03430 Mismatch repair
PAS_chr1-4_0269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppa03032
]
PAS_chr1-4_0269
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr1-4_0269
DNA replication proteins [BR:
ppa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PAS_chr1-4_0269
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PAS_chr1-4_0269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
RuvB_N
nSTAND3
AAA_16
AAA_14
AAA_18
AAA_17
PTCB-BRCT
AAA_assoc_2
RNA_helicase
AAA_33
NTPase_1
AAA_28
Motif
Other DBs
NCBI-GeneID:
8196940
NCBI-ProteinID:
XP_002490384
UniProt:
C4QXY0
LinkDB
All DBs
Position
1:join(1892663..1892719,1892769..1895438)
Genome browser
AA seq
908 aa
AA seq
DB search
MVDIRDFFGNAKQSTATQSKLKRKVSDAEKIVSKKPKTPTEDENVRSKANQSPFFSSNGD
SQAANNKGDAINLDSDDDDLYISILDEDSPEKPKSPISQRKRKNSPTEEFPKKPKSPVKK
KASSTPKSKPVVNVESMDSPKPEPKINNADAQGVEAPKLAEKSTNQFNGLSAEAILETIP
DAELPEEQDTAKLNLRDFKKKQTELPQSSTPLEDLPQGRPNCLIGLTMVFTGVMPTIDRT
QAEELAKRYGAKVTKSVSKKTSVVVLGSEAGPSKVKKIKDFKIKAIDEDGFITLIKSMPA
DGGSGEAAAKALEKKKQEEELSIKQAEKEEAESQKNPSAQEATNSALWTVKYAPANLNQV
CGNKTNIKKLTNWLSNWFENKRSGFKHPGPDGTGVFRACLISGPPGIGKTTAAHLVAKSL
GFDIIEKNASDVRSKSLLMSDVKTVLDNTSLVGFFHSQDNAESNQRKFCLIMDEVDGMSS
GDHGGVGALAQFCRITSTPIILICNDKSLPKMRPFDRVTLDLPFRRPSASELKSRIMTIA
HREKLQLDPNVIDQLVEATKNDIRQIINLLSTVSKTQKIIGFENAAEIKQAWKKEVALKP
FDITSRILSGGIYAPSSNFSLNDKLGLFFDDIDFSPLMVHENYRSTVPTKLANVSPNEEN
LKHLELLSQAADSISEADLVNNCIRGGEQQWSLLPFFGLLSTVRASSFVAGSLRGRINFT
SYLGQNSKKLKYDRLLQELQYHSSTKTLTNNIEFRLSYMSPLITKLSHPLLEKGTEGIDD
VLSTLDAYCLTKEDWDTIMDFGIGSYSMALKLKKIPPSVKTAFTRKYNSYTHPTVIYATG
NSVSSTRVKVTPDLEDVVQDDMDDVEDDTPTDEGKSDIKNDKLIKEVKPKKKKATSKAKS
TATKRKNN
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggtagatatcagagacttctttggcaatgctaaacaaagcactgccactcaatcaaaa
ctaaagcggaaggtttctgatgcggagaagatagtgtcgaaaaaaccaaagactccgaca
gaagatgagaatgtgcggtcaaaagcaaatcagagcccctttttctcttcaaatggcgac
agccaagcagcaaataacaaaggtgatgcgatcaatttggactctgatgatgatgatctg
tatatttccatccttgacgaagactcacctgagaaaccgaagagtccaatttcacaaaga
aagagaaaaaattccccaactgaagaatttcctaaaaaaccaaagtctccagtaaagaag
aaagcatcatctaccccgaaatctaaacctgttgtcaacgttgaatctatggacagtccc
aaaccagaacctaagatcaataatgctgatgcccaaggagtcgaagctcccaaattagca
gaaaaatctactaaccaattcaatggtctttctgctgaagcaattcttgaaactatccca
gatgcagagttaccagaagagcaagataccgcaaagctgaatttaagagacttcaaaaag
aaacaaacagagcttcctcaatcgtccactccccttgaagatttaccacagggtagacct
aattgtttgatcggattgaccatggtatttacaggtgtgatgcccactatagatcgtact
caagctgaagaattagctaagagatacggtgcgaaggtgaccaaatctgtcagcaagaaa
acgtcagtggtagtcttagggtctgaagccggtccttcgaaagtgaaaaaaattaaggat
ttcaaaatcaaagccatagatgaagatggattcatcactttaatcaaatctatgcctgct
gatggtggttctggtgaagcagcagccaaagccctagaaaagaagaaacaagaagaagaa
ttatcaatcaagcaggctgagaaagaagaagccgagtcacaaaaaaatcctagtgcccag
gaggccaccaattcagctttatggacagtaaaatatgcaccagcaaacttgaatcaagtt
tgcggtaacaaaacgaacataaagaagctgaccaattggctgtcaaactggtttgaaaat
aaacgatctggttttaagcatcccggtccagatgggaccggagtatttagagcatgcctt
atcagtggaccaccaggaattggaaaaactaccgcagcacacctagtggccaaatcgtta
ggatttgacattattgaaaagaacgcatcagatgttagatcaaaatctttgttgatgagc
gatgtgaaaactgttttggacaatacttctctggttggcttctttcattcacaagacaac
gctgaaagtaaccaaaggaagttttgtttgataatggatgaagttgacggtatgtcaagc
ggagatcatgggggtgttggagcattggctcaattttgtcgaattacttcaactcctata
attctaatctgtaatgacaaatcattacctaagatgagaccttttgacagagtcacattg
gacttgccatttagaagaccaagtgcttctgaattaaaatctagaattatgaccattgcg
catagagaaaaactacagttagatcccaatgttattgatcagttggttgaagcaacgaaa
aatgacatccgtcaaattataaacctgttgtccacggtttccaagacacaaaaaattatt
gggtttgaaaacgctgcggagattaagcaagcatggaaaaaggaggttgcattgaaacct
tttgacattaccagtaggattctatccggaggaatctacgccccaagttcaaatttttca
ctgaatgacaaattggggcttttcttcgacgatattgatttttctccattgatggttcat
gagaattatagaagcacagtgccaacaaagctggcaaatgttagccctaacgaggagaat
ttgaaacacttagaattactctcccaggctgcagattctatttccgaggctgatctggtg
aataattgcatcagaggcggagaacaacagtggtccttactaccattctttggtctttta
tcgacagttagagcctcaagctttgtagcaggttcgttgagaggaaggatcaatttcaca
tcatacttgggtcaaaattcgaagaagctaaagtacgatcgattattacaggagctacag
tatcattcttctacgaagactttgacaaacaacatagagttcagactctcatacatgtca
cctttgatcacaaaactttcccatcctctgcttgaaaagggcactgaaggaatcgacgac
gtactatctacgcttgatgcatattgtctcacgaaagaagattgggacactattatggac
tttggaattggatcctactctatggctcttaaattgaagaagatacccccttctgttaag
acggcttttactagaaagtacaattcttacacccatccaacagtgatttatgctactgga
aactctgtctcttctacgcgagtgaaggttaccccagatttagaggatgttgttcaggat
gatatggacgatgtcgaagatgacacaccaacggatgaaggtaaatccgatatcaaaaat
gacaagctcattaaggaagtcaagccaaagaagaaaaaagcgacttcaaaggcgaaatca
accgctaccaagagaaaaaataattga
DBGET
integrated database retrieval system