Komagataella phaffii: PAS_chr1-4_0309
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Entry
PAS_chr1-4_0309 CDS
T01092
Name
(RefSeq) Subunit of the SWI/SNF chromatin remodeling complex
KO
K11772
SWI/SNF complex subunit SWI3
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0309
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr1-4_0309
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
PAS_chr1-4_0309
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
PAS_chr1-4_0309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
8197759
NCBI-ProteinID:
XP_002490431
UniProt:
C4QY27
LinkDB
All DBs
Position
1:complement(1980656..1983070)
Genome browser
AA seq
804 aa
AA seq
DB search
MSLNELQAEPKDKDPIISQDSDSSMADAIEDGNVPEPGERDSLSRSRSRSDSEIEEDQAV
RVDGRNQNGEQVVEAITSDVANDEQRLPNPISLKKSPSEPVLEADIHVKQENESQAESDD
KSQGTPEQEEPSQSQTQRITHTEQENRSAEPKQELGSKSELEELEPELSVQGPKSNGSAT
KKGTPEEKSVFRPSASSDESTAEGTPIASPKVTDDVSSKPIFDDKVNASSSKASPKTTPK
AATPKESHKPTPVLDADEDENLEDDKTDYVKAEVVERPLPEDKPQTHTIVIPSYSTWFSL
RRVSDIEKKSLPEFFNNVNKHKTEALYIKYRNFMVNTYRMNPNEYLTVTACRRNLIGDAG
TIMRVHRFLNRWGLINYQVNAELRPQNINPVSTESYRIDYDTPRGLFPFETYKPPTKLPD
LTHIKKLLRSDDVETTTNEPPKKKVKLFTEPDKNQGWNEEKLGKLFEGIKQYGNNWNQIA
QHVGDKTPEQCILRFLELPIEDKFLEENPQLLGPLKYIPRLPFSPVDNPVMSTLAFLATL
VDHSVASAASTRAIRAIEKIIVNKIELKEDKSKEEPQGETTDKETNTIKSERKQSTDDTE
KSPRTNTPSEIKPTSEKEKEENKEEVLEKPAENVKEREDPLEDIKDAGVNSFGIVASRAH
VFATYEERELHKHIISLVNQQMKLVDIKLAKVSKLEKEFEFKKKKLKVQQERNFLERISL
SKSTGQVHDKLMEAVNLLENCDSSEKIKSILDEAKELALKPSNIETIVRKIGANDANPDG
TKDRDDSVKPISLDSPQLYRYWSG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaatgaattacaggcagagccaaaggataaagaccccataattagtcaggat
tcagattcttctatggctgatgctatcgaggatggaaatgtgcctgaaccaggagaacgt
gatagtttgtcgaggtctcgaagtaggtctgactctgaaattgaagaagaccaagctgtt
agagtagatggaaggaatcagaatggggagcaagtagttgaagccatcactagcgatgtg
gccaatgatgagcaacggctgccaaacccaataagtctaaaaaaatcaccatcagagcca
gtattagaagctgatatacatgtaaagcaagaaaacgaatcgcaggctgagtcggacgat
aaatcgcaaggaactccagaacaagaagaaccatcacaatcacagacacaacgaattaca
catacagaacaagaaaatcggtcagcagaacccaagcaagagctaggaagcaagtcagag
ttggaagagctagagccagaactttctgtgcaaggccctaaaagtaacggaagtgcaaca
aaaaagggaacaccagaagaaaaatctgtgttcagaccatctgcttcctctgacgaatcc
actgctgagggaacgcccattgcttcccccaaagtcactgacgatgtttcatccaagcca
atctttgatgacaaggtcaacgcttcatcctcaaaggcctcaccaaagacaacaccaaaa
gctgctactccaaaggaatcgcacaaaccaacacctgttctggatgcagatgaagatgaa
aatttggaagatgacaaaacagattatgtcaaagctgaagtagttgaaagaccgttaccc
gaagataaacctcagacacatactattgtcataccatcttacagcacatggtttagtttg
agaagggtcagtgatatcgagaaaaagtcccttccagagtttttcaataatgttaataaa
cataaaacagaggccctatacataaagtacagaaactttatggtgaacacttatagaatg
aatccaaatgagtacttgactgtaacagcatgtcgccgcaatctgattggagatgctgga
acaattatgagagttcatcgtttcctcaacagatggggactgattaactaccaggttaac
gctgagttaagacctcagaatataaaccctgtctctacagagagctacagaatagactac
gatacaccgagaggtttgtttccgtttgaaacttacaaacctcctacaaaattaccagat
ctgactcatatcaagaaacttctacgaagtgatgacgtagaaactactaccaatgagcca
cccaagaagaaagtgaagctatttacagaaccagataaaaatcaaggttggaacgaagag
aagttagggaaattattcgaaggaatcaaacagtacggcaacaactggaaccaaattgcc
cagcatgtgggtgacaagacccctgaacagtgtatattgaggtttttggaattacctatc
gaagacaagtttcttgaagagaacccacaattactaggacctttgaagtatattcccaga
cttcccttctcccctgttgataacccggtaatgtcaacccttgcctttctcgctacgttg
gtcgatcattcagttgcttctgctgcttctactagagccatcagggcaattgaaaaaata
attgttaataagattgagttgaaggaggataaaagtaaagaggaacctcagggtgaaact
acagataaagaaactaatacgatcaagtctgaacgaaagcagtcgacggatgatacagaa
aagtcaccaagaaccaatactccctctgaaataaagccaaccagtgagaaagaaaaggaa
gaaaacaaagaagaagtattggagaagccagctgagaatgtaaaggaaagagaggaccca
ctagaggatataaaagatgctggtgtcaacagttttggtattgttgcttctcgagctcat
gtatttgcaacttatgaggaaagagaattacacaaacatattatctctctcgtaaatcaa
caaatgaagctggtggacatcaaactcgctaaagtgtcaaagctagaaaaagaattcgaa
ttcaagaagaagaagttgaaagttcaacaggaaagaaactttttagagagaatttctttg
tccaaatccacaggtcaagtccatgacaaattgatggaagcagtgaacctgttagaaaac
tgtgactcaagtgaaaaaatcaaaagtatccttgatgaagcaaaggagttagcgttgaaa
ccttcgaacatagaaacaatagttagaaagataggtgctaatgatgccaatccggatgga
acgaaagatagagatgactccgtcaaacccattagtttggattctcctcagttatataga
tactggtcaggttaa
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