Komagataella phaffii: PAS_chr1-4_0311
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Entry
PAS_chr1-4_0311 CDS
T01092
Name
(RefSeq) Highly conserved nuclear protein required for actin cytoskeleton organization
KO
K14856
protein SDA1
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr1-4_0311
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PAS_chr1-4_0311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
EF-hand_14
Motif
Other DBs
NCBI-GeneID:
8197761
NCBI-ProteinID:
XP_002490433
UniProt:
C4QY29
LinkDB
All DBs
Position
1:complement(1985666..1987807)
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AA seq
713 aa
AA seq
DB search
MVRRQRAAILPNNIILLQNLVRRDPKSYEEEFLQQYSHYQSLRDIYLSDANSGNEGADEF
GELIGFVSSVCQCFPQETKQFPSDLNSLLINNYKELDVDLREKIIQCLVMLRNKDVISPE
FLIQTIFPLLISQETSIANIKQLRKQIYQTLISLLKAVNVGSKNQKLNRSTQALLFNLLE
QQTTQGLWATRLTRELWRRGIWDDSRTVEIMTHAALHPDVKVSIAGVKFFLGADKERDEA
QDSDDDEEPDLAQLKHQAQITKKTGKKAKKLETALKTLKKKGSAKHSATYLNFSAIHLLR
DPQGFADELFSKQLQGKRANKYSLEQKIDIVNLISRLIGTHKLTCLGIYTFLLKFLTPKQ
QDVTQFMAAAAQASHDLVPPESITIVVKKIADEFISDGVATEVAAAGLNTVREILARAPL
AIDADLLQDLTEYKGSKAKSVMMAARSLITLYREVAPEMLARKDRGKEASMGMKSGSRKG
LPQFGLDSALTNTNDLALLAKWKEEHKDEDKVGDEWEVEEEEEEESDEGEWVNVDDDTEA
KTSGKKRAYEDDDSDLELSDDERNTDKNKNSDKDSNMDQVQKLLSSDILTPADFAKLHEL
KTKAGVEKIMGQSIFGLNEQHVDSSKLVGSTKYKQNKEERLAHVKAGRDEDAHGSRRGKR
EGEHSTTNKEKARKKNFLMTIHKRGVQSKQKMALRDKQKVLRAHIDKQKKKGH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaagacaaagagcggctatcttgccgaataatatcattttattgcagaacttg
gtccgtagagatcccaagtcttatgaagaggagtttctccaacagtattctcattaccaa
tcgttgagagatatctaccttagtgatgctaacagtggtaatgaaggagctgatgagttt
ggagagctgattggattcgtcagtagcgtctgccagtgttttccacaagagactaagcaa
tttccatctgacttgaatagtcttctgatcaataactacaaagaacttgatgttgacttg
agggagaaaataattcaatgccttgtgatgttgaggaataaagacgttataagccccgag
tttttaatccagacaatatttccactactgatttcacaagaaacatctattgccaacatt
aagcagcttcgaaagcagatctatcagactttaatatctttacttaaagctgtaaatgtc
ggttccaagaaccagaaattgaacagatcaactcaagctctgctttttaatctactagaa
cagcaaaccactcaaggtttatgggcaacaaggctcacaagggagctgtggagaagaggt
atttgggacgactctagaacagttgagattatgacccatgctgcattgcaccctgatgtg
aaagtatctattgcaggtgtaaagtttttcttaggtgctgataaagaaagagacgaggcc
caagactcggatgatgacgaggaacctgatttggcacaactgaagcatcaagcgcagatt
actaagaaaacaggaaagaaggctaagaaactagaaacagctcttaaaaccttgaagaag
aaaggatccgctaaacattcagctacgtatctaaacttctcagctattcatttactcagg
gacccacaaggttttgcagacgaacttttctccaaacagttacagggtaaacgtgccaac
aaatacagtctggaacaaaaaattgatatagtgaatctgatttctagattgattggtacc
cataaactaacatgtttgggaatttacacatttttattaaaattcttaactccaaagcaa
caggatgtaactcaattcatggcagcagcagctcaagcatctcatgacttagtgccacct
gagtccattaccatagtggtcaagaagatcgcagatgagtttatcagtgatggtgttgcg
acagaagtagcagcagcaggattgaacaccgtaagggaaattttagcaagagcgccattg
gctattgatgctgacttgctacaggatctgaccgaatacaagggctctaaagctaaatcc
gtaatgatggcagcaagatcgttgatcactttgtatagagaagtcgctcctgaaatgctt
gccagaaaggatagaggtaaagaagcttccatgggaatgaagtctggtagcagaaaaggt
cttccacaatttggtttggactctgcccttacgaacaccaatgatttggctcttttggct
aaatggaaagaagaacataaggatgaagataaggtaggtgatgaatgggaagttgaggag
gaagaagaagaagaatctgacgagggtgaatgggtcaacgttgacgacgacaccgaggcg
aagacttctggaaagaaaagggcctacgaagatgacgactccgatctggaactctctgac
gacgaacggaataccgacaagaacaaaaactcagacaaggactccaatatggatcaagtt
cagaaacttttgtcttctgatattttaactccagctgattttgctaaactgcatgaattg
aaaacaaaagctggagtggaaaagatcatgggccaatctatttttggactcaacgagcaa
catgtggactcctccaaattggttggatcaactaaatacaagcagaataaggaagagaga
ttggctcatgtcaaggctggtcgtgatgaagatgctcatggttctagaagaggaaagaga
gaaggagagcattctaccactaataaagagaaggctcgtaagaagaacttcttgatgacc
atccacaagagaggtgtgcaaagcaaacagaaaatggctcttcgtgataagcaaaaggtt
ctacgagctcatatcgataagcaaaaaaagaagggtcattaa
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