Komagataella phaffii: PAS_chr1-4_0319
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Entry
PAS_chr1-4_0319 CDS
T01092
Name
(RefSeq) Protein required for export of the ribosomal subunits
KO
K14794
ribosomal RNA-processing protein 12
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr1-4_0319
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
Other 90S particles
PAS_chr1-4_0319
Pre-60S particles
Other pre-60S particles
PAS_chr1-4_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
RTP1_C1
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
8197769
NCBI-ProteinID:
XP_002490441
UniProt:
C4QY37
LinkDB
All DBs
Position
1:complement(1998904..2002518)
Genome browser
AA seq
1204 aa
AA seq
DB search
MTSDYDPELEAKLAKIRVHASSKLENQKHMALILSAVEENIQEQNNPRTAVTYFVSFMSL
LDRCIQDDIITDNALALSTAYFLDLLAPLTPKSLLKSNFAEILTKIAPAITNEQAEAPLI
RSSIGVLETLLLSQDLASWKNASSMNISPKRGLMGLLELTLDSRPKVRRRAQEAISKILS
NPPPGPSVEHPGSLDCADFATNKLIETMRLQKSKRKSEDRSANSAVIHCLQLISQITNTN
SWPNVRIELVCDLLLEVAKSSDQFLITNAFQAFENLFNSMSEDELSIDKFDSVIKIILDL
KPSVNDTHLAAPWLAVVAKASTAYSNANQTRFIKKFPIFVQTIIQFFSSESENICISTSQ
CLIAIITEGIHDDSLLIPSKQFPISPKLYESVDESITQLAEAVNSLLSVKYNHCLSDILN
LISCIFIKLRSRANPDFLNCLEIVGAWRSDEQNFQYIQEADNVIGSAIGALGPEAVLSVL
PLNLDSPKKTGRAWLLPLLRDNVRNANLSYFKTQLAPLIKFFEQKIASSTGDSVHAKIFA
TIIDQIWSLLPHFCDLPTDMPTEFDDEFASELASLMYSKVELRVTICQAFKSLVESNLVY
SSGALSEDKLLQQQFPKESAAANIEVLSKMSSKLLSVLFNVFSQTVPELRGFILETIEPY
LQISSQDDLVDSFKKVCLHLNQALEEDKKNITQAQLDGKKLPNQKLSTGEIPRLSVTMMD
LIVVMVKYIPESSYNALLSIFNQTVAIDDSLIQKRSYRIIARLLETESGKNAVEQFLPQI
ESLFIDSAETTHIPAKAARFQALLRLIPILPDDHLYFIPSILSEVIITIKDPKERSRLLA
YDVLKAMAFRMQKGGVVITSKVPGMDPDTPNTQASLSEYFTMCSAGLAGSTAHMIGATIN
AISYLFYEFRNDMDRDLLNEVSSTVELFLTSKNREIVNATLGFVKVSILTLPSDVVKENL
PNLLANLMRWSHEHRGNFKTKVKHMVERLIRKFGADLVEQAIPEEDRKLIANIKKTKRRE
KRKAVEGDNEPEKSKAKSKTGFTSAFEDAIYNDSEDSEDDGDEDEPSNGKSRQYITESKD
EPLDLLDQQTLARISSSKPKKFSKKDLAAKAGFRTNQEGKFVINNKIDDDLLDNKASGID
AYVEAVRNGPVKGQRNKLKYLRGKKANNDEDFGDESDEEPAATKKNMFNKIRKPKQKFKA
GRKL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagactatgatcctgaattagaggcgaaactggccaagatcagggttcatgcc
agctcaaaattggaaaatcagaagcacatggccctgattctatcggctgttgaagaaaac
attcaagagcagaataatccaagaactgcggtaacatactttgtatccttcatgtcttta
ttggacaggtgtattcaagatgatatcatcactgataatgctttggctctatctacagca
tacttcctggatcttttggcacctctgaccccaaaatctttgttgaaatccaattttgca
gagatcttaaccaagattgcccctgctataacaaatgaacaagctgaagctccattgatt
agatcttccattggtgttttagaaacgttgttgttgtctcaagacctggcttcttggaag
aacgcatctagcatgaatatttccccaaagagaggtttgatgggattgttggagttaacc
cttgactcaagacctaaggttagaagaagagcacaggaggctataagcaagatattatct
aatcctcctccggggccatcagtagaacatccgggttccttagattgtgcagactttgca
acaaacaaattaatagagacaatgagacttcaaaagtccaagcgaaagtcagaagataga
tccgccaactctgcagtcattcactgccttcaattgatttcacaaatcacaaacacaaac
tcgtggccaaatgttagaattgaattggtctgtgatctattacttgaagttgccaaatca
tcagatcaatttctcatcaccaatgcctttcaagcctttgaaaacctcttcaactcaatg
tctgaagatgaattgagtatcgacaaatttgactcggtaatcaagattattttggatttg
aaaccttctgtgaatgatacccatctcgctgctccttggttggctgttgtcgcaaaagct
tctactgcatattctaatgccaatcaaaccagatttattaagaaatttccaatcttcgtt
cagacaataatccagttcttttcttctgagtctgagaacatctgcatttcaacatcccaa
tgccttatagccatcatcactgagggaatccacgatgattctttattaattccctcaaaa
cagttccctatctctcctaagttgtacgaaagtgttgatgaatccattactcaattggct
gaggctgtcaactccctattgtctgttaagtacaaccattgtttaagtgacattttgaac
ctaattagttgcatttttatcaagttgagatctagagccaatccagactttcttaactgt
ttggagattgtgggtgcctggagatctgacgaacagaacttccaatacattcaggaggct
gacaatgtcattgggagcgcaattggtgctttgggccccgaagctgtactcagtgtatta
ccattgaatcttgacagccccaagaagacaggaagagcttggttactgcctttacttagg
gacaatgtcagaaacgccaatctttcctacttcaaaacccaacttgctccgctgatcaag
tttttcgaacaaaagattgcctcttccacaggtgattcagtacatgcaaaaatctttgcc
actataattgatcaaatttggtcgctgctaccacatttctgtgatttgccaactgatatg
ccaactgaatttgacgatgagtttgcttcagagctagcgtctttgatgtactccaaggtg
gagttgcgtgtcactatttgccaggcattcaagtccttagtcgagtccaatctggtctac
agttctggtgctctttctgaagacaaacttcttcaacaacagtttcctaaggagtccgca
gctgccaacattgaagtactatccaagatgagctctaaactcctttctgttcttttcaat
gtgttcagtcaaacagttccagaattacgaggattcatcttagaaactattgagccttat
ctgcaaatttcttcgcaagatgatttggttgattcgttcaaaaaggtctgtttacattta
aatcaagctcttgaggaagataagaaaaacattacacaagcccaacttgacggaaagaag
cttccgaaccagaaactctccacaggcgaaattccaagattgagtgttactatgatggat
ttgattgtcgttatggttaagtacattccagaatcttcatacaatgccctcctgtccatc
tttaatcaaacggttgcaattgacgattctttgattcagaaacgatcttaccgcatcatc
gctaggctactagaaactgaatctggaaaaaacgcagtagaacaatttttgccacaaatc
gaatctttgtttattgacagtgctgaaacaactcacattcccgccaaagctgctagattt
caagctttgcttcgtttgatcccaatattaccagatgaccatctttacttcattccatcc
atactctcagaagtaattatcactatcaaagatcccaaagaaaggtcgaggctattagct
tatgatgtactgaaagctatggcttttaggatgcaaaaaggcggtgttgtgataacatcc
aaagttcctggaatggatccagacactccaaacacacaagcatccctttcagagtatttc
acaatgtgttcagctggtctcgctggttcaactgcccacatgattggagctaccatcaac
gccattagttacttgttttacgagtttcgtaatgatatggatagagatcttctcaatgaa
gtctcatctacagtggaattgttcttgacctccaagaacagagaaattgtcaacgctacg
ttaggatttgtaaaagtatccatcctcacacttcctagtgatgttgtcaaagaaaatctt
ccaaacttgttggccaatttgatgaggtggtctcatgaacacaggggaaacttcaaaacg
aaagtgaagcatatggttgagagactaatcagaaagtttggcgccgacttagttgaacag
gcaattccagaagaagacaggaaactgattgccaacattaagaagaccaagagacgagaa
aagaggaaggcagtggaaggagacaatgagccagaaaagtccaaggcaaagagtaagact
ggattcacctctgcattcgaagatgccatttacaatgattcggaagattcagaagatgat
ggtgatgaagacgaacccagtaacggaaaaagccgacagtatatcacagaatccaaggat
gagcctctggatcttttggatcaacaaaccttggctcgcatctcctcctccaagcctaaa
aagttcagcaagaaagaccttgctgccaaagcaggctttcgtaccaatcaagaaggaaaa
ttcgtcattaacaataaaattgatgatgacctcctggataacaaggcttctggaatcgac
gcttacgttgaggctgtaagaaatggacctgtcaagggacagagaaataaactcaagtat
ttgagaggtaagaaggctaacaatgatgaggactttggtgatgagagtgatgaagaacca
gcagctacgaagaagaatatgtttaacaagattagaaagcccaagcaaaagttcaaggcc
ggtagaaaattatag
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integrated database retrieval system
