KEGG   Komagataella phaffii: PAS_chr1-4_0359
Entry
PAS_chr1-4_0359   CDS       T01092                                 
Name
(RefSeq) RNA polymerase II subunit B12.6
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ppa  Komagataella phaffii
Pathway
ppa03020  RNA polymerase
ppa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PAS_chr1-4_0359
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAS_chr1-4_0359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr1-4_0359
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr1-4_0359
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PAS_chr1-4_0359
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PAS_chr1-4_0359
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cytochrome_C7 Lar_restr_allev DUF7351 zf-C2H2
Other DBs
NCBI-GeneID: 8197807
NCBI-ProteinID: XP_002490483
UniProt: C4QY79
Structure
LinkDB
Position
1:2069838..2070179
AA seq 113 aa
MTNVNSLSNNMLYPKEDKENQRLLYSCRNCDYTELAEDPKVYRHELITNIGETAGIVDDI
GQDPTLPRSDKECPECHSRDCVFFQSQQRRKDTNMTLFYVCLNCKKTFRDESE
NT seq 342 nt   +upstreamnt  +downstreamnt
atgactaacgttaattctcttagcaacaatatgttgtatcccaaagaggacaaggagaac
caaaggctgttgtactcatgtcgaaactgtgactacacggaactcgctgaagatccgaag
gtttacagacacgagctgattaccaatattggagaaacggctggtattgtggatgatatt
ggccaggatcctactctaccaagatcagacaaagaatgcccagaatgtcattctcgtgat
tgcgtgtttttccaatcgcaacaacgacgtaaagatactaacatgacactgttctatgtg
tgtcttaattgtaaaaagactttccgggatgaatcagaatag

DBGET integrated database retrieval system