Komagataella phaffii: PAS_chr1-4_0365
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Entry
PAS_chr1-4_0365 CDS
T01092
Name
(RefSeq) Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL
KO
K11360
transcriptional activator SPT8
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0365
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr1-4_0365
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PAS_chr1-4_0365
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PAS_chr1-4_0365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
8197813
NCBI-ProteinID:
XP_002490489
UniProt:
C4QY85
LinkDB
All DBs
Position
1:complement(2080197..2081750)
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AA seq
517 aa
AA seq
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MTLSQGTTDNDTSSQEAPKESSPMDVDSSVKVSKEPSQEPSNEAFKNNGPTPSADSLASI
RRSLRKSAFEAVNFDIAPYAAIPYSCAIHSIALTSGPRWLFTGGDDGFVRKFDFLASIEG
KLPLTVAQKHSLVDSVTHAGVLNSYWENEQPVLQDELDLLPNTEVKRKEDNLGSYEPKIN
PVYSLAVQKDGLWLLSGLESGGISLQSAKYQEGSIVHYFPHGTKHNHKERHTTTVSCLTL
NSSETGFLSGSWDNKVLQWDLNTGSCVTEYSPTTSQISTLHYRPITGCEINVDTPIEDND
DVDSLFGDSDDENVKTDFQNDLKDRDYQIVKSDHVFMTSSMDGSLNIWDARASASNVLRI
SVPPTTPPWAMSAVWSVSGDSIFVGRRNATVEEIDLKMPSKRSSNTNPVTNPIRTLRFPS
VSGPVSCVRTLFNGRHVLCGSHDNIRLYDIRLHQEEAQASKKSRSKTPFLIIAGHHGGVI
SDMYIDPTFRFMISASGNRGWQGTSTETVMIYEISIK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacactctcccaggggactacagacaatgacacttcatcacaagaggctcccaaagag
tcttctccaatggatgttgactcctctgtgaaggtatcaaaagagccttctcaagagccc
tccaatgaagcgttcaagaataatggtcctaccccatcagccgattcgttggcttcgata
agaaggtctcttcgtaaaagtgcattcgaagctgtgaattttgatatagcgccatatgcc
gcaattccttattcatgtgcaatccactcgatagctctcacaagcggacctcgttggcta
ttcactggaggtgatgatggattcgttcgaaaatttgattttttagcttccattgaggga
aaattgccgttgactgtagcacagaagcatagtttggtggattcagtgacacatgcagga
gttttgaattcttactgggaaaatgaacaacctgtattacaagacgaactggatttacta
cccaatacagaggttaaaagaaaggaagacaacttaggtagttatgaaccaaaaataaat
cccgtttactcattggcagtacaaaaagacggtttgtggcttctgagcggtcttgaatcc
ggtggaatctctctacaatctgccaaatatcaagaaggatcaattgtacattattttcca
catggaacaaaacacaatcataaagaaaggcatacgacaaccgttagttgcttgactcta
aatagttcagaaactggttttttaagtggttcttgggataataaagtacttcaatgggat
ttaaatactggatcttgtgtcacagagtactcgccaaccactagccaaatttcaacttta
cattacagaccgatcaccgggtgtgaaattaatgtggacacacccatagaagataatgat
gatgtcgactctctgttcggggacagtgacgatgaaaacgtgaagactgattttcagaac
gatttaaaagacagggattaccaaattgtcaaatccgaccacgtttttatgactagttca
atggacggatcactcaacatctgggatgctcgtgcatctgcttccaatgtacttcgaatc
tctgtccctcctactactcccccatgggctatgtctgctgtatggtctgtatcaggagat
tctatttttgtaggaaggaggaacgctactgtggaggaaattgatctaaagatgccttct
aaacgaagctctaacacaaatcctgtgacaaaccctattagaacactcagattcccatca
gtatcaggaccagttagttgtgtccgcactctttttaacggccgacatgttttatgtggc
tctcatgataacattagattatacgatatacgattgcatcaagaggaagctcaagcttct
aagaaatcaagatcgaaaactccattcttaatcattgcaggtcaccacggtggtgttatc
agtgacatgtatattgacccgacattcagattcatgatcagtgccagcggtaatagaggt
tggcagggaactagcacagaaacagtgatgatctacgaaatcagtatcaaatga
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