Komagataella phaffii: PAS_chr1-4_0414
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Entry
PAS_chr1-4_0414 CDS
T01092
Name
(RefSeq) Splicing factor
KO
K12817
pre-mRNA-splicing factor 18
Organism
ppa
Komagataella phaffii
Pathway
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr1-4_0414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppa03041
]
PAS_chr1-4_0414
Spliceosome [BR:
ppa03041
]
Complex C
Other components
Step II factors
PAS_chr1-4_0414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
Motif
Other DBs
NCBI-GeneID:
8197888
NCBI-ProteinID:
XP_002490544
UniProt:
C4QYE0
LinkDB
All DBs
Position
1:2167126..2167908
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AA seq
260 aa
AA seq
DB search
MGDALAQMATTKNSKPLERLGFSNKSINTSPQNEASSSNLASSGTRVQLSEQDLKTIPRL
TVIRDRIKADLEANAISTDQMSAIDQVKTLVSFKKDRLKQSIKSVPSQCEDTEIKPSDLH
NDQTKIRLQLRQYLFDTLKEMNNDPSIQLTDIEFDQLKQDMAILLTLLRNGTLPENLLIT
LTTTMYNVQKGSFQQATSSYLQLSIGNVAWPMGVKATNIHSRKGDDKITKGSANISKNDG
TERWLLALKRVITYKEKKTV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgctctagcccaaatggcaactaccaagaactctaagcccctggagcgcttg
ggtttttctaacaaatcaataaatacaagccctcaaaatgaagcttcatcatcaaacttg
gcatcctctggcacccgagtgcagctttctgaacaagacttgaaaacaattcctaggtta
actgttatcagagacagaattaaagcagacttggaagcaaacgcaatatctaccgatcaa
atgtccgcaattgatcaagtcaaaacacttgtttcatttaaaaaagaccgactcaaacag
agtattaaatcagttccatcacaatgtgaggacactgaaatcaaaccatcagacctccat
aacgaccaaacgaagattcgtttgcagctgaggcaatacttgtttgatactttgaaagaa
atgaacaatgatccatcaatacaactgacagatatagagtttgatcagttgaaacaagat
atggcaatcttgttgactctattacgaaatggtactcttccagagaacctattaatcaca
ttaaccaccaccatgtataacgtacaaaagggaagtttccagcaggcgacatcctcatat
cttcagctcagcattggaaatgtcgcttggcctatgggtgtaaaggctacaaacattcat
tctagaaaaggagacgataaaattactaaaggttcagccaacatttccaaaaatgatgga
acagaacgttggctactggcgttgaaaagagtcattacctacaaggaaaaaaaaacagtc
taa
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