Komagataella phaffii: PAS_chr1-4_0546
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Entry
PAS_chr1-4_0546 CDS
T01092
Name
(RefSeq) Clathrin heavy chain, subunit of the major coat protein
KO
K04646
clathrin heavy chain
Organism
ppa
Komagataella phaffii
Pathway
ppa04142
Lysosome
ppa04144
Endocytosis
ppa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PAS_chr1-4_0546
04142 Lysosome
PAS_chr1-4_0546
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PAS_chr1-4_0546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr1-4_0546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr1-4_0546
Membrane trafficking [BR:
ppa04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
PAS_chr1-4_0546
Exosome [BR:
ppa04147
]
Exosomal proteins
Proteins found in most exosomes
PAS_chr1-4_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
TPR_8
Vps39_1
Motif
Other DBs
NCBI-GeneID:
8197433
NCBI-ProteinID:
XP_002490682
UniProt:
C4QYS8
LinkDB
All DBs
Position
1:complement(2412412..2417382)
Genome browser
AA seq
1656 aa
AA seq
DB search
MSSDIPIEFTEPLQLTDIGIQPQFLDFRSTTLESDRFVCVREQGANGNTVSIIDLHNNNN
VTKKNMTADNAIMHPSQNVISLRANGTTLQIFNLDTKQRLKSFTMSEPVIFWKWLNEQTL
GLVTQNAIFEWNVFDGTGDGPVRLADKHVSLTNNQIINYVSNKDNTWIAVTGIAQEEGRI
VGHIQLYSKARNISQAIDGHVCNFATLKLSGASVDTQVFVCGNRTATGGQLHVIEIDHQE
GAPVFQKKNVDIFFPADAANDFPVSVHVSQKYGIIYLLTKYGFIHLYDVESSTSLFVNRI
SAEPVFTAASYNNGTGIIAINRSGQVLTVDLSRESFIPYILNKLSNIPLALSLASRSGLP
GAENLFTQQFNQCLASGDYDNAAKIAASSEQLRTSETINRLKNLQPAPGQISPILSYFSI
LLDKGTLNKFESIELAKPVLQQDKKPLFEKWLKEDKLQSSEELGDIVKPFDTTLALAVYM
RAQVPVKVVSCLAEIGQFDKILPYCEKVNYHPEYTILIQNIVRVNPDKAAEFATSLLRQT
PGLDIEKIADIFLSQNYIQQGTAFLLDALKDDKPAEGHLQTRLLEINLLHAPQVADAILG
NNMFSQYDRPTIAALAEKAGLFQRALEHFDDIKDIKRVIVNTQAFPTDWLVNYFGKLNVE
QSVACLREMLSKNIAQNLQVVIQVATKYSDLIGPVTLIKVFEEFKCTEGEYYYLASIVNV
TQEPEVVFKYIEAAAKLGQVKEIERVTRENNVYNGEKVKNFLKEAKLDDQLPLIIVCDRY
DFVHDLVLYLYKNKFFKFIEVYVQQVNPSKTPQVIAGLLDVDCDEAIIQSLLQTVIGQVP
IAPLVEEVEKRNRLKLLLPFLEQTLQGGSADKTVYDTLAKIYIDSNNNPEKFLQDNDNYD
TLVVGKYCEKRDPYLAYIAYSKGQNDEELIKITNENAMFKYQARYLLSRSDRQLWSVVLS
EDNMYRRQLIDQVVGTAIPELEDPEPVSLAVEAFMDADLPSELIELLEKIILEPSPFNDN
PSLQELLILTAIKADQTRVDSYIEKLDDFDPEEIGSLATEAGLYEEAFKVYNKFELYGKA
LKVLVEDVMSLDRGEEYAEKLDKPELWSQLGAAQLNGLRIPEAIESYIKAGDPSNFEQVI
DIAEHAGKEEELIPFLKMARETLREPKVDGAIINAYANTDRLNDIEHFLQLSNAADLESI
GDKLYEKHNYEAAKLLYSSISNYSKLASTLVYLGDYQAAVDCARKASNVKVWKQVNEACI
DNKEFRLAQICGLNLIIHAEELDELVNKYEYFGYFDQLLSLFENGLGLERAHMGMFTELA
VLYTKYSPDKTMEHLKLFWSRINIPKVLRACEAAHLWPELIFLYCHYDEWDNAALTIIER
SSSAFEHSSFKEVIVKVSNLEIYYKAINFYLNEHPSLLTDLLSVMIPRIDLPRVVKLFQK
SDNLPLVKPFLISVLDKNNSIVNQAYHDLLIEEEDYKSLRSVIESNDKFDALGLAERLEK
HEVIFFRQIAAVLYRKNKKWNKAISILKTDRLWSDVIETAAISGSEKVASETLQYFVETG
NKECFVATLYACYHLVNPDSILELSWLHGLGDYTKPYEISIAKNNQDRINELYKDLKKRQ
SQETNADDEQAGSQRLLLTNGTGIGLQPTGTGFGGF
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgatattccaatcgagttcacagaaccccttcagttgaccgatatcggcatc
cagccccaattcctggattttcgatccacgacgttggaatctgatcgtttcgtgtgtgtc
agggaacaaggtgccaatggcaacactgtcagcatcattgacttgcacaacaacaacaat
gtgaccaaaaagaacatgacagcggataatgccatcatgcatccatctcagaacgttatt
tctctgcgtgctaacggaacaaccctacagatcttcaacctggataccaaacagagacta
aagtcgttcacgatgtcagaacccgttatattctggaaatggctcaatgagcagactctt
ggtttggtaactcagaacgcaatttttgagtggaatgtatttgatggcactggggatggt
ccagttagattggccgataaacatgtctctttaaccaacaaccagatcatcaactatgta
tcgaacaaggacaacacttggattgcagtcactggtatcgctcaagaagagggacgcatt
gtaggccacatccaattgtactcaaaggcaagaaatatctcccaggcaatcgacggtcac
gtctgtaatttcgccacattgaaattgagcggtgcctccgtcgacacacaggtatttgta
tgtggtaacagaacggccaccggtggtcaattacacgtaattgaaattgaccatcaagag
ggagctcctgttttccagaagaagaatgtggacattttctttcctgcagatgcagccaat
gatttcccagtatccgtccatgtttctcaaaaatacggtatcatctatctgcttacaaag
tacggtttcattcacttgtacgatgttgagtcaagcaccagtttgtttgtaaacagaata
tcggcagagcctgtatttactgccgcttcatacaacaatggtaccggtatcatcgccatc
aacagaagcggccaggtgctaactgttgacctctccagagaatcgttcattccttatatt
ttgaacaagctctctaacattcctttggctctatctcttgcttcaagaagtggacttcca
ggagctgagaatctttttactcaacaatttaatcagtgcttagcctcaggagactacgac
aatgctgccaagattgctgcctcttctgaacaactgagaacttctgagacgatcaaccgt
ctgaagaacttgcagccagccccaggtcagatctcccctatcttgagttacttttccatc
ctattggacaagggaaccttaaacaagttcgagtccatcgaattggctaagcccgttcta
caacaggataagaagcctctattcgagaaatggttaaaggaagacaagctgcaatcatcc
gaggagcttggtgacatcgtcaagccttttgataccacacttgccttggctgtctacatg
cgtgcacaagttccagttaaggtagtgtcatgccttgctgaaattggccaatttgacaag
atcttgccttactgtgaaaaggtcaactatcacccagaatacactatcttgattcaaaat
attgttagagtgaatccagacaaagcggctgagtttgccacatccttattgcgacaaact
ccaggtttagacattgagaaaattgctgatattttcttgtctcaaaactacattcagcaa
ggtaccgctttccttttggacgcattaaaagatgataaaccagcagagggccatttgcaa
acgcggttattggagattaatcttttgcatgctcctcaagtggctgatgctattctgggg
aacaacatgttttcgcaatatgaccgaccaactattgccgcattggcagaaaaggctggt
ttgtttcaaagagcattggagcactttgacgatatcaaggacattaagcgagtgattgtg
aacactcaagcttttccaaccgactggttagtcaactactttggcaaactcaacgttgaa
caatctgtagcatgtttaagagaaatgctctccaagaatattgcacagaacttgcaggtt
gtgattcaagtggccaccaaatattcagacttgataggaccagtaactttgatcaaggtg
tttgaggaatttaagtgcacagaaggtgaatactattatttggcctctattgttaacgta
acgcaagaaccagaagttgtcttcaagtacattgaagccgctgctaagttgggacaagtt
aaagaaatcgagagagtcaccagagagaataacgtctacaatggtgaaaaagttaagaac
ttcttgaaagaagctaagttggatgaccagttacctttgatcattgtttgtgatcgttat
gactttgttcatgatttggtattgtacctgtacaagaataaatttttcaagtttatcgaa
gtttatgttcagcaagtcaatccttccaaaacaccacaagtcattgcaggtcttttggat
gttgattgtgatgaggccattatacaatccctactacaaacagtaattggccaagttcca
attgccccattggtagaggaagtcgaaaagcgaaacagattgaagctgttgcttcctttc
ttagaacaaactcttcaaggagggtctgctgacaaaaccgtgtacgacactttggccaaa
atttacattgactctaacaacaatcctgaaaaattcttgcaggataacgataactacgat
acacttgttgttggtaaatattgtgaaaagagagatccataccttgcttacattgcttat
tctaagggtcaaaatgatgaagaactcatcaaaataacaaatgaaaatgcaatgttcaaa
taccaagcaagatacttattaagtagatctgaccgtcaattgtggtcagttgttctttct
gaagacaacatgtacaggagacaacttatcgaccaagttgttggtactgccattccagaa
cttgaagatcctgagccagtatcattggctgtcgaggcttttatggacgccgacttgcca
tctgaactgattgagctgttagaaaagattatcttggagccttcccctttcaacgataac
ccttccttacaggaactattgattttgaccgccatcaaggctgatcaaacaagagttgat
tcatacattgaaaagcttgatgactttgatccggaggagattggctctttggccacagaa
gctggattgtatgaagaggcattcaaggtgtacaacaaatttgaactgtacggtaaggct
ttgaaggtgctagtggaagatgtcatgtctcttgatagaggtgaagaatatgctgaaaag
cttgacaaacctgaactgtggtcgcaattgggtgctgcccagctaaatggtttacgaatt
ccagaggctatcgaatcttatatcaaggctggcgatccttccaactttgagcaagtcatt
gacattgcggagcatgcaggaaaagaggaggaacttattccattcctaaagatggctaga
gaaaccttaagagaaccaaaggttgacggcgctatcatcaatgcctatgctaacacagat
agattgaacgatattgaacactttttgcaattgtcaaatgctgctgatcttgaatctatt
ggtgacaagttgtacgaaaagcacaactatgaagctgcgaagctgctttattccagtatt
tctaactacagcaagctggcatctaccttagtttacctgggagattaccaagctgctgtc
gattgtgctagaaaggcatccaatgtgaaggtatggaagcaagtcaacgaagcttgtatc
gataacaaagaattccgtttggcccagatctgtggtttgaatttgatcattcatgccgag
gaacttgacgagcttgttaacaaatacgaatactttggatactttgaccaacttctttca
ttgtttgaaaacggtctagggttggaacgtgctcatatgggtatgtttactgagcttgct
gttttgtacacgaagtattctccagataaaaccatggagcatttgaaattgttttggtct
cgtatcaacattccaaaagttttgagagcttgtgaggctgctcatctatggcctgaactg
attttcttatactgtcactacgatgagtgggacaacgctgctttgactatcattgaaaga
tcaagtagtgcatttgaacacagctcattcaaggaggttattgtcaaggtgtcgaactta
gaaatctactacaaggctatcaacttttacctgaacgagcatccatcgttgttgacggac
ttgctatctgttatgattccaagaatcgacttaccaagagtagtaaagttgttccaaaaa
tcggacaacctcccattagtgaagccgttcttaatctccgtcttggacaaaaataactct
attgtgaatcaagcataccacgatttgcttattgaagaagaggattacaagtctttgaga
tcagtaattgaatccaacgataagtttgatgctctaggactggcagaaagattggagaaa
catgaggtaatctttttcagacaaattgcagcagtcctttaccgtaagaacaagaagtgg
aacaaagctatttccattttgaaaacagataggttgtggagcgacgtcattgaaactgca
gccatttctggtagtgagaaggttgcatctgaaacattgcagtacttcgttgagactggt
aataaggagtgctttgtagccactttgtatgcctgttatcatctagtcaaccccgactca
attttagaattgagctggcttcatggtttgggtgattacactaagccttatgaaatctcc
attgccaaaaataatcaggacagaatcaacgagttgtacaaggatctgaagaagaggcag
agccaagaaacaaatgctgatgatgaacaggcagggtctcaaagattgttgttaaccaat
ggtactggcattggtctgcaaccaaccggtactggatttgggggattttag
DBGET
integrated database retrieval system
