Komagataella phaffii: PAS_chr1-4_0609
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Entry
PAS_chr1-4_0609 CDS
T01092
Name
(RefSeq) Cullin, structural protein of SCF complexes
KO
K10609
cullin 4
Organism
ppa
Komagataella phaffii
Pathway
ppa03420
Nucleotide excision repair
ppa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PAS_chr1-4_0609
09124 Replication and repair
03420 Nucleotide excision repair
PAS_chr1-4_0609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr1-4_0609
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr1-4_0609
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr1-4_0609
Ubiquitin system [BR:
ppa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
PAS_chr1-4_0609
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PAS_chr1-4_0609
TCR (transcription coupled repair) factors
Cul4-CSA complex
PAS_chr1-4_0609
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PAS_chr1-4_0609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
8197739
NCBI-ProteinID:
XP_002490748
UniProt:
C4QYZ4
LinkDB
All DBs
Position
1:complement(2544555..2546927)
Genome browser
AA seq
790 aa
AA seq
DB search
MEAQVPISAKLNRLAGLIEEQGAPTDQEKGDDLPSLPTKEFLFQPIKLAELKQSPVLKKR
KVGPPPPQNEDQSLPIQAWKDELLQFTEDTLNGSKCSKPLQYYNSICTFLCRSGYTKQVS
KELIQSIEGYFAKVLLPEVKEEILNDGENAIQHLVDAWNIWYTKTKRIHFVVIFLNQLYL
LNSSSRQSIDVLATKLFVENLLELEGHEGDGELMLYDQSQKPTRLKILLNLSEWIKELKT
TGKLTNQNLYNEFKEIIKNFEIDNKIKLKNVLPDMIRVCDEQLKNKWIGDEKLAKDYVTK
VQNSMLISQDLAKEWDAKFEKIRQREIHFFVVEPIYRITQELVPSLFYLDIDSIEFLMFC
VKDNPNNYRLILDAFGDIVKKQLEECFNSDSLYTEDYILQPNNIFVTWNQKLENRISYVE
LESQLEKALTDSLNLHQEKVIRALLSFIESNMKKRSRSDYLELVSFIFTKLKNKAAFLKQ
YQNQLSKRLLYNSSIQFDDEEFIINNLKTDDVTAEIGPLASMIQDIKISSKLTSSITNDT
PIEMDYKIIRDLSWPKVPLDYDVRLPQYLLSVVDNPELKEKVVKKNMVRYKWCNFLHRFE
IETSFKGEAKTLVVNGYYAAIILAFNDSESLTLAQLAKVTELEKQYLIECLKVLCLGKYK
LLLRNNQSQPLKGTPFRDDDVFSINTDFSDRSKKLFIKPAKGFKNDEPITSNYYDAQKET
TNRINAFIMRTMKQQRDCSHSKLLADILSFLKEYNISIPKASIVKECIEELIKQGYLKRD
ASGSSYHYIP
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcaagttccaatcagtgccaagttaaaccgtcttgcgggcctcattgaggag
caaggggcccccactgatcaggaaaagggtgatgatctacctagcttacctacaaaagag
tttctttttcagcccatcaaactggcagaactcaaacagtcgccagtactgaagaaaagg
aaggtgggccctcctccaccgcagaacgaagaccaatcgttgccaattcaggcgtggaag
gacgaactgcttcaattcacagaagacaccctgaatggctcaaagtgttcgaaaccctta
cagtattacaattccatttgcacgtttttatgtaggagtggctacacgaagcaggtttcc
aaggagttgattcaatcgattgaggggtattttgctaaagttttattgcctgaggtgaaa
gaagagatcctaaacgatggagaaaatgcgattcaacaccttgtcgacgcttggaatatc
tggtacacgaaaaccaaaagaatccatttcgtcgtcatttttctgaaccaattgtatttg
ctaaactcatcttccagacaaagtatcgatgtgcttgcaacgaagctgtttgtggagaac
ttgctggaactagaaggacacgaaggagatggggaattgatgctttatgatcaaagtcag
aaacctactcgactgaaaattcttttaaatctatcagagtggatcaaggagctgaaaaca
actggaaagcttacaaaccaaaacctttacaacgaattcaaggagataatcaagaatttt
gagattgacaataagattaaattgaagaatgtcctccccgatatgataagggtatgtgat
gaacaactgaagaataaatggataggagatgagaaattggctaaagattatgtcacaaag
gtccagaattcaatgctgattagtcaagatttagctaaggaatgggatgctaagtttgag
aagattcggcaaagagaaatccacttctttgttgtggaaccaatctatagaatcactcag
gagctagttccatcattgttttatctagatattgactcaattgaattcttgatgttttgt
gttaaggataaccccaataattacagattgatcttggacgcttttggtgatattgtaaag
aaacagctcgaagaatgtttcaactcggattcgttgtatacggaggattacattttacag
ccgaacaatatttttgtaacctggaatcaaaaactagaaaacaggatatcatatgtcgag
ttggaaagtcaacttgaaaaagcattaaccgattctctgaatctacatcaagaaaaagtg
attcgtgccttgttgtcttttatagagtccaacatgaagaagcgttcacgctcagattac
ttggaactagtcagtttcatttttaccaagctcaagaacaaagccgcatttctgaagcaa
tatcagaaccaattgtcaaaaagactgctatacaattcatccatacagtttgatgatgaa
gagttcataataaacaatctcaagacggatgatgtaaccgctgagattggtcctcttgcc
agcatgattcaagacatcaagataagctcaaaactgacgtccagtattaccaatgatacg
cccatagaaatggattataagatcatcagggacttgagctggcccaaagttccccttgat
tatgatgttcgcttgcctcagtacttgctttccgttgtggacaatccggaacttaaggag
aaagttgttaagaagaatatggttcgttacaagtggtgcaattttctacatcgatttgag
attgagacttccttcaagggcgaggccaagacgttggtagttaacggctactacgccgca
attatcctagcatttaatgactctgaaagtttgacgttagcacagttggcaaaggtgacc
gagcttgaaaagcagtacctcatagaatgtcttaaagtcctttgtcttggaaaatataaa
cttctacttagaaacaatcagtctcagccattgaaaggtacgccattccgagacgatgat
gtcttttcaattaacactgacttttcggacagatccaagaaattgttcattaaaccagcc
aaaggcttcaagaatgatgaaccaattacatcaaattactacgacgctcaaaaggaaact
acaaacagaattaatgccttcataatgagaacgatgaaacaacaaagggactgttcacat
tccaaactactggccgacatcctatcctttttgaaagaatataatatttcaatcccaaaa
gcgtcgatcgtgaaggaatgcatagaagaactcatcaaacagggatacctgaaacgagat
gcgtccggctcctcctaccactacatcccttga
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