Komagataella phaffii: PAS_chr1-4_0620
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Entry
PAS_chr1-4_0620 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K11361
transcription factor SPT20
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0620
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr1-4_0620
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PAS_chr1-4_0620
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PAS_chr1-4_0620
SLIK complex
PAS_chr1-4_0620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
CCDC93_CC
DSHCT
Motif
Other DBs
NCBI-GeneID:
8197828
NCBI-ProteinID:
XP_002490759
UniProt:
C4QZ05
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(2566685..2568238)
Genome browser
AA seq
517 aa
AA seq
DB search
MSQIQSSQVGAKNMQTAQPQAQQRPINGSVTLSNGQRINPQNLTPQQQRLLQQKVLHQKL
KNYKFAETSEEILHKYEKFPPSLTFHIHENHYRFGDQDGVIPKNSSVIKAFLEYVAREEI
PPALIEVTKDAGVQLYEGCIILRIYDHRHLVAHINDAKDSQHVSSESSANNTNNEKKEPS
KVPKTYTTILRPTQLSLYADLLYQTDYLQVRFTDSLSLNIETEILTASKRNLDLSVPLNP
HRATANLKPEVKYPYYDPETDTVVHEHRPDARGNMVNADTVDYRKLHEDMAQHGSDYERL
MLLLSDRFDDDSQTQGSSVTSSQFMRLRFVEAWRKKEERLQESGGSSQRQRPLQPGQIPG
MLSSFSSNTGNMNTMLDNLTPQQKAAIQQRMIQQGRAQPQQQQPDQEQLQEQQQQQPQQA
MSQQRQQQLQQLYQRQQQHNQHHQQNQDELSSLDDKKIKKPPAKKQKKMTKKEMTTLHQN
VAGKTIPSAESTPPTTAANKKRGTYKKKNKYILIIND
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaatccagtcaagccaagtgggggcgaaaaatatgcaaaccgcacagcctcag
gctcaacaaagaccaatcaatgggtctgtgaccctgagcaatggccagaggataaaccct
cagaacttgactccacaacaacaaagattattgcaacagaaagtactgcatcagaaactc
aaaaattacaaatttgccgaaacgagtgaggagatacttcacaagtacgaaaaattccct
ccctctttgacttttcacatccacgaaaatcattatagatttggcgatcaggatggggtc
ataccaaaaaactcaagtgttattaaggctttcctggagtatgttgcacgagaggaaata
ccaccggcgttgatagaggtaaccaaggatgctggtgttcaactatatgaagggtgtatc
atactcagaatatatgaccatagacacttggtcgcccatatcaatgatgcaaaagattct
caacacgtaagttcagaatcgtccgctaacaacacaaataatgaaaagaaagaaccctca
aaagttcctaagacttacacaactattctcagaccaacgcagttgtcattatatgctgat
ttgttgtaccaaactgattatttacaagttagatttacagactctttgtctttgaatatt
gaaacggaaatcctaacagcctcaaaaagaaatcttgacctttctgttcctttgaaccct
cacagagccacggctaatttgaaaccagaggtaaagtatccttattacgaccctgagacg
gataccgtggtgcatgaacacaggccagatgctcgtggtaacatggtgaatgcagacact
gttgactacaggaaattgcatgaggatatggcgcagcatggctctgactatgagaggtta
atgctactgttgagtgatagattcgatgacgactcccagacacagggttcctctgtcacc
tccagccagttcatgaggctgaggtttgtagaagcttggaggaaaaaggaagaacgtctt
caagaatccggaggctctagtcaacgtcagagaccccttcaacctggccagattccgggg
atgttgtcaagctttagtagtaatacaggaaacatgaatacaatgttggacaacttaaca
ccacagcagaaagctgctattcaacaaagaatgatccagcaaggaagagctcagccacag
cagcagcagccagaccaagagcaactacaagagcagcaacaacaacaaccgcaacaggcc
atgtcacaacaacgtcagcagcaattacagcaattgtatcaacggcagcaacaacataat
cagcatcaccagcaaaaccaagatgaactcagttctttggatgacaagaagataaaaaaa
cctccagctaaaaagcaaaagaaaatgaccaaaaaggaaatgactacacttcatcaaaac
gtagcggggaaaactatcccttcagctgaaagtactccgcccacaacagcagccaacaag
aaaagaggcacctacaagaaaaaaaataagtacatcctaataataaatgattag
DBGET
integrated database retrieval system