KEGG   Komagataella phaffii: PAS_chr1-4_0633
Entry
PAS_chr1-4_0633   CDS       T01092                                 
Name
(RefSeq) 5' to 3' exonuclease, 5' flap endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ppa  Komagataella phaffii
Pathway
ppa03030  DNA replication
ppa03410  Base excision repair
ppa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAS_chr1-4_0633
   03410 Base excision repair
    PAS_chr1-4_0633
   03450 Non-homologous end-joining
    PAS_chr1-4_0633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppa03032]
    PAS_chr1-4_0633
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr1-4_0633
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppa04147]
    PAS_chr1-4_0633
DNA replication proteins [BR:ppa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PAS_chr1-4_0633
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PAS_chr1-4_0633
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PAS_chr1-4_0633
Exosome [BR:ppa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PAS_chr1-4_0633
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5 DprA_N
Other DBs
NCBI-GeneID: 8197841
NCBI-ProteinID: XP_002490774
UniProt: C4QZ20
LinkDB
Position
1:complement(2595585..2596706)
AA seq 373 aa
MGIKGLNALINEHSPKAFRNGEMKTFFGRKVAIDASMCLYQFLIAVRQQDGQQLANEEGE
TTSHLMGFFYRTIRMVGYGIKPCYVFDGKPPVLKGGELEKRLKRREEAEKQRLDMKETGT
LADIAKFERRTVRVTREQNDQAKKLLELMGIPYVDAPCEAEAQCAELAKGGKVYAAASED
MDTLCYETPYLLRHMTTAEARKLPVTEIDYAKVMEGLEMELPQFIDLCILLGCDYCETIK
GVGPVTAFKLIKEHGSIEKVVEAIENNPKSKQKIPENWPYNEARELFLHPEVIPASECEL
EWKEPDEEALVDYMVRQHGFSEQRIRDGASKLRKSLKTGTQGRLDKFFVVKKRPAEEKKG
KNTKEEKPKKKRK
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgggtatcaagggactgaatgctctaataaatgagcactctcctaaagctttcagaaat
ggcgaaatgaaaactttcttcggaaggaaagtggccattgacgcatcaatgtgcttgtac
cagttcttaattgcagtgaggcaacaagatggccagcagttagccaacgaagaaggagaa
accacctctcacctaatggggttcttttataggacaattcgaatggttggatacggaata
aagccgtgttacgtctttgatgggaaacctccagttctgaaaggaggagagttagaaaaa
cgtttgaagagaagagaggaagccgaaaaacagagattggacatgaaagaaacaggaacc
ttggctgacattgccaagtttgaaagaaggaccgttagggtcacacgtgaacagaatgac
caagctaagaagctgcttgaattgatgggaatcccctatgtagacgctccatgtgaagct
gaagcacaatgcgcagaattggctaaaggagggaaagtttatgctgcagcttctgaagat
atggatacgctatgttatgaaacgccatatttgttgagacacatgaccactgctgaggct
cgtaagttgcctgtcactgaaattgattatgctaaggttatggaaggtcttgaaatggag
cttccccagttcatagatttatgtatacttttgggttgtgattattgtgagactattaag
ggggtaggcccggtaacagcgtttaaactgatcaaagaacatggctccatagagaaagtc
gttgaggcgattgaaaataatccaaaatccaaacaaaaaattcctgaaaattggccatac
aatgaggccagggagcttttcttgcatcccgaagtgataccggcttctgagtgtgaatta
gagtggaaagaaccagatgaagaagcattggtagactatatggttcgccaacatggattc
agtgaacaaagaataagggatggcgcatccaaactacgtaaatccttgaaaacgggcacc
caaggacgtttggacaaattctttgtggttaagaaaagaccagcagaagaaaagaaggga
aagaacacaaaggaagagaaacccaagaaaaagagaaagtaa

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