Komagataella phaffii: PAS_chr1-4_0679
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Entry
PAS_chr1-4_0679 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ppa
Komagataella phaffii
Pathway
ppa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAS_chr1-4_0679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr1-4_0679
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PAS_chr1-4_0679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
OMS28_porin
Motif
Other DBs
NCBI-GeneID:
8197002
NCBI-ProteinID:
XP_002490543
UniProt:
C4QYD9
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All DBs
Position
1:complement(2165858..2166976)
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AA seq
372 aa
AA seq
DB search
MSVKEEQTQEVKLESPENSDGYDSDLEDATERDTRLRKLLNLDLEEADKKVWLVRLPKFL
ADKWKDPKNLNGQELGKLRITQAPASVNVKERPSPQVQIILNDSSENKELPLRYDVNIHK
RVVDNEYIFSERNLKEYKTEANEIASMPEQPELKPVETEIDPEPPRGFKRYRDESKSYVS
YVKTIPKDTAIVGTVIHECQAIPVRNDRNYSKVVESRKNLRYVKPKSKVTLLDNLPGVIQ
SNITPNLMRNKNSTFLRSEKKDRRAEGRAIRMPQNQLLDVLFGLFDQYEYWTLKGLREKT
SQPEAYLKEVLESVAELNKKGPYALRYSLKPEYKKLRDAERRARLLASGQAAPDKNDYDD
DEEENVEMVEIA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaaagaggaacaaacacaggaagtaaaattggaatcaccagaaaactcagac
ggctatgacagcgatttagaagacgccactgaaagagatacaaggctcagaaaactgttg
aatttggacttggaagaagcggataaaaaagtttggttggttagattgccgaagttccta
gccgacaaatggaaggacccgaaaaacttgaatggacaagagttggggaagttgcgcatt
actcaagctcctgccagtgtgaatgtgaaagaaagaccttcacctcaggttcagattata
ttgaatgactcttctgagaataaagaacttcccttacgatacgatgtcaatattcataag
agagtagtcgataatgaatacatttttagtgaacggaatttgaaagagtacaaaacagag
gccaatgagatagctagtatgcctgaacagcctgaattgaagcctgttgagacggagatt
gacccagaaccccctagaggattcaaacggtacagagatgaatcgaagagttatgtttcc
tacgtcaagacaatccctaaagacacagctattgtgggtactgtaattcatgagtgtcaa
gcgattccagtcagaaatgatagaaattactctaaagttgtggaatctcgtaaaaacttg
cgatacgttaaacccaaaagtaaagtcacattgctggataacctacctggagttatccag
agtaacataacaccgaacttgatgcgtaataagaattcgaccttcttacgttcagaaaag
aaagatcgtcgggcggaaggtagagccatcagaatgcctcagaaccagctactggatgta
ttatttggactatttgaccagtatgaatactggactttgaaagggttgagagagaagacc
tcgcagccagaggcttatttgaaggaggttttggagagtgtagcagagttaaacaagaag
ggaccttacgctttgcggtactccttgaaacctgaatacaagaaactgcgagacgccgaa
cgacgggcccgtcttctggctagtggacaagctgctccagataagaatgactacgatgat
gatgaagaggagaatgttgagatggttgagatagcttga
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integrated database retrieval system