KEGG   Komagataella phaffii: PAS_chr1-4_0679
Entry
PAS_chr1-4_0679   CDS       T01092                                 
Name
(RefSeq) hypothetical protein
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ppa  Komagataella phaffii
Pathway
ppa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PAS_chr1-4_0679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr1-4_0679
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     PAS_chr1-4_0679
SSDB
Motif
Pfam: TFIIF_beta_N TFIIF_beta OMS28_porin
Other DBs
NCBI-GeneID: 8197002
NCBI-ProteinID: XP_002490543
UniProt: C4QYD9
LinkDB
Position
1:complement(2165858..2166976)
AA seq 372 aa
MSVKEEQTQEVKLESPENSDGYDSDLEDATERDTRLRKLLNLDLEEADKKVWLVRLPKFL
ADKWKDPKNLNGQELGKLRITQAPASVNVKERPSPQVQIILNDSSENKELPLRYDVNIHK
RVVDNEYIFSERNLKEYKTEANEIASMPEQPELKPVETEIDPEPPRGFKRYRDESKSYVS
YVKTIPKDTAIVGTVIHECQAIPVRNDRNYSKVVESRKNLRYVKPKSKVTLLDNLPGVIQ
SNITPNLMRNKNSTFLRSEKKDRRAEGRAIRMPQNQLLDVLFGLFDQYEYWTLKGLREKT
SQPEAYLKEVLESVAELNKKGPYALRYSLKPEYKKLRDAERRARLLASGQAAPDKNDYDD
DEEENVEMVEIA
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcggtcaaagaggaacaaacacaggaagtaaaattggaatcaccagaaaactcagac
ggctatgacagcgatttagaagacgccactgaaagagatacaaggctcagaaaactgttg
aatttggacttggaagaagcggataaaaaagtttggttggttagattgccgaagttccta
gccgacaaatggaaggacccgaaaaacttgaatggacaagagttggggaagttgcgcatt
actcaagctcctgccagtgtgaatgtgaaagaaagaccttcacctcaggttcagattata
ttgaatgactcttctgagaataaagaacttcccttacgatacgatgtcaatattcataag
agagtagtcgataatgaatacatttttagtgaacggaatttgaaagagtacaaaacagag
gccaatgagatagctagtatgcctgaacagcctgaattgaagcctgttgagacggagatt
gacccagaaccccctagaggattcaaacggtacagagatgaatcgaagagttatgtttcc
tacgtcaagacaatccctaaagacacagctattgtgggtactgtaattcatgagtgtcaa
gcgattccagtcagaaatgatagaaattactctaaagttgtggaatctcgtaaaaacttg
cgatacgttaaacccaaaagtaaagtcacattgctggataacctacctggagttatccag
agtaacataacaccgaacttgatgcgtaataagaattcgaccttcttacgttcagaaaag
aaagatcgtcgggcggaaggtagagccatcagaatgcctcagaaccagctactggatgta
ttatttggactatttgaccagtatgaatactggactttgaaagggttgagagagaagacc
tcgcagccagaggcttatttgaaggaggttttggagagtgtagcagagttaaacaagaag
ggaccttacgctttgcggtactccttgaaacctgaatacaagaaactgcgagacgccgaa
cgacgggcccgtcttctggctagtggacaagctgctccagataagaatgactacgatgat
gatgaagaggagaatgttgagatggttgagatagcttga

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