Komagataella phaffii: PAS_chr2-1_0154
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Entry
PAS_chr2-1_0154 CDS
T01092
Name
(RefSeq) Nuclear envelope protein with multiple putative transmembrane domains
KO
K14315
nucleoporin NDC1
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr2-1_0154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-1_0154
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr2-1_0154
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Med2
Motif
Other DBs
NCBI-GeneID:
8198538
NCBI-ProteinID:
XP_002491041
UniProt:
C4QZT7
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Position
2:281363..283225
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AA seq
620 aa
AA seq
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MTIEDAKPKLIYYKTIFEQVQRKRLSFVNRIVVLLTFFSSLFIGIFAGSSLWFWPLKWLL
LGVSLILVRHCKESTQTLENPGFKTFFRQILGQIFCADFVSHLLAYGISGFTYWVILFSQ
KSDDLTYYIITPTRTVLPYINDQFVYFWFFFGTLVLWQSIQQAVFLRNKLNFQIGVYRIE
PRSEFNLINFTTVLSGSLTSSVLVSLSTPILYVLSRSSVYNVLLYPFYWVLGLNHNRPHL
NIGFGLFCSLFYHSLLLTLQWEFVNLVYDIYVRIGCIDKDKALSLQSADPVNTLLSGLKD
VNHPFVQFTAFQELAYIATSSKPEDRKLFYSVHSKNSYVWNTILEECTSYINENIKHIER
RMVEFDDITKFLQPRPAEISGGLRRSELAVPPTIFGNSKHQASSEGTPEYDSANEIFATP
TSPGKLSSQFYSLAHDYNNIDNIHLVVQPIQKVLLGYYQLLIQSSIGVPFRKTLSREAAS
RVKNPVLLGNIIIAFSTFLLHSQTEDKVGVVKGSLAQALEILAKLISATGNFTDHPPLPP
TMLETEQPKTHIIAIIHDLSMKQFFELAVKFNHVLNDLILSPTVFKLAKWSIDTAIEEQK
KQETLQKKQTLKATGVSILH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagaagatgccaaacccaaattaatctactacaaaacgatctttgaacaagtc
caaagaaaacgtctgagctttgtgaacagaattgttgttttgttgacctttttctcgtca
cttttcattggcatttttgcaggttcatcactttggttttggcctttgaaatggttattg
ctgggtgtttctttgatcctggtcaggcattgcaaggagtcaactcaaacgttggaaaat
cctggtttcaaaacctttttcagacaaattctgggccagatattttgtgcagattttgtc
tcccatcttttggcatatggaatatcaggtttcacttactgggttatcttattctcacag
aagagtgacgatcttacgtattatattatcactcccacaaggacagtgctaccttatatc
aacgaccagtttgtgtacttttggttcttttttggcactttggtgctatggcaatcaatt
caacaggcagtattcttgcgaaacaaactaaactttcaaattggtgtgtaccgcattgag
ccacgttcagaattcaatttgatcaacttcaccactgtcttgagtggatcattgacctct
tcggttttggtctctctttcaacaccaattctatacgttttgtcaagatcttcagtttac
aacgtattgttatatcctttctattgggttcttgggctgaatcacaacaggccacatttg
aacatcggatttgggttattctgttccttgttttaccattctctcctgttgactttacag
tgggagttcgtgaacctggtgtatgacatttatgtcagaatagggtgcatagataaagat
aaggcactttctctgcagtcagcagacccagtcaatacacttctcagtggcctcaaggat
gtcaatcatccattcgtacagtttactgctttccaggaactggcctacattgcaacttca
tctaaaccagaagatcgaaaactgttttattctgtccattctaagaactcctacgtttgg
aacacaatattggaagaatgcacttcatatatcaacgaaaatatcaaacacatcgagcga
cgcatggtcgaatttgacgatattactaaatttcttcagcctcggcctgctgaaatcagt
ggtggcctaagaagatcagaactagcagttcccccaactatttttggcaactctaaacac
caggcatcttcagagggtactccagagtatgattctgcaaatgagatatttgcaacccct
acgtctcctggaaagttgtcgtcacagttctactcacttgcccatgactacaataatatc
gataatattcatttggttgtccaaccaatccaaaaggtcttacttggttattaccagctg
ctaatccaatcaagcatcggggtgcccttccgcaaaactctcagtagagaggctgccagt
cgtgtcaaaaaccccgttttgttggggaacatcattatagcattttccactttcctcctg
cactctcaaacggaagataaggttggagtagtcaaagggtctttggcccaggcgctagag
atattggcaaagctgatatctgccacaggaaatttcacagatcatcctcctctgcctcct
acaatgttagaaactgaacaaccaaaaactcatatcattgctataatacacgatctatcc
atgaaacaattttttgaactggctgtgaagttcaatcacgtcttgaacgatttgattttg
tcaccaacagtcttcaaacttgctaaatggtctattgatacggccattgaagagcaaaag
aaacaggaaactctacaaaaaaagcaaacattgaaagccactggtgtatccattctgcat
tga
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